RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RNF14Q9UBS8 474 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CTNNAL1Q9UBT7 734 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 TEKT2Q9UIF3 430 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 NBPF19A0A087WUL8 3843 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CROCCQ5TZA2 2017 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 A0A1W2PQ72 361 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 OR2W5A6NFC9 320 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 URADA6NGE7 173 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 NCF1BA6NI72 391 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 A8MUI8 341 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 NCF1CA8MVU1 366 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 WDR47O94967 919 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 CYC1P08574 325 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ZNF888P0CJ79 500 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 RNF224P0DH78 156 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 NCF1P14598 390 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ALOX12P18054 663 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 HNF4AP41235 474 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 AGTR2P50052 363 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 EFNA3P52797 238 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 OLR1P78380 273 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ACTN3Q08043 901 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 C2orf54Q08AI8 447 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 FRG1Q14331 258 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ABRAXAS2Q15018 415 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 RBBP5Q15291 538 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 DEFB134Q4QY38 66 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 HIST2H2BCQ6DN03 193 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 TMEM207Q6UWW9 146 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 MAATS1Q7Z4T9 603 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ANKRD37Q7Z713 158 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ADAMTSL2Q86TH1 951 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 THOC6Q86W42 341 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 PDSS2Q86YH6 399 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ZNF740Q8NDX6 193 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ABHD11Q8NFV4 315 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 OR5T3Q8NGG3 340 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 FAR1Q8WVX9 515 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 PSMF1Q92530 271 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 MOCOSQ96EN8 888 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 PDLIM2Q96JY6 352 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 OR4K3Q96R72 315 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 AIF1LQ9BQI0 150 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 UNKQ9C0B0 810 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 SPNS1Q9H2V7 528 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 RHOJQ9H4E5 214 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 PELI2Q9HAT8 420 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 KCNK13Q9HB14 408 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ABI3Q9P2A4 366 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ZFP69BQ9UJL9 534 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 ERRFI1Q9UJM3 462 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 IKZF3Q9UKT9 509 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 OSGIN2Q9Y236 505 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 SLC22A14Q9Y267 594 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 OARD1Q9Y530 152 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 SLC22A7Q9Y694 548 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 KCNE2Q9Y6J6 123 aa9.11□□□□□ -0.95
NPLOC4-212ENST00000573328 FAM187AA6NFU0 413 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 E7ESA3 106 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 PSMD12O00232 456 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 RAD51CO43502 376 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 B4GALT2O60909 372 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 PIAS1O75925 651 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 WDPCPO95876 746 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 B3GALT4O96024 378 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 FHP07954 510 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 MYBL2P10244 700 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 EDN3P14138 238 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 JAK1P23458 1154 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 SSTR1P30872 391 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 CASQ1P31415 396 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 SCTRP47872 440 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 TNFSF10P50591 281 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 OR4D2P58180 307 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 TAS2R39P59534 338 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 REEP5Q00765 189 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 PWP1Q13610 501 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 TSNQ15631 228 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 NSDHLQ15738 373 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 EXT1Q16394 746 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 PPP1R3AQ16821 1122 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 ZXDCQ2QGD7 858 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 SFT2D3Q587I9 215 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 FCRLBQ6BAA4 426 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 NIPAL1Q6NVV3 410 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 PAPD4Q6PIY7 484 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 CCDC25Q86WR0 208 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 SHISA5Q8N114 240 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 AMER2Q8N7J2 671 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 TRPV3Q8NET8 790 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 OR4K1Q8NGD4 311 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 CCT6BQ92526 530 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 HAS2Q92819 552 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 TSLPQ969D9 159 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 TSPAN17Q96FV3 270 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 PDLIM5Q96HC4 596 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 OR1F2PQ96R84 312 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 LPAR4Q99677 370 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms