RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HERC3Q15034 1050 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 PCOLCEQ15113 449 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 TMEM205Q6UW68 189 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SBSNQ6UWP8 590 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 CAPN12Q6ZSI9 719 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 NKAPQ8N5F7 415 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SIRT6Q8N6T7 355 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR51Q1Q8NH59 317 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 SLC5A11Q8WWX8 675 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 TM4SF19Q96DZ7 209 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 PDLIM5Q96HC4 596 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 VPS39Q96JC1 886 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 TUBB6Q9BUF5 446 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 MOCS1Q9NZB8 636 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 NTNG1Q9Y2I2 539 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 DYRK1BQ9Y463 629 aa11.69□□□□□ -0.54
CTDNEP1-205ENST00000570828 TRBC2A0A5B9 178 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZNF860A6NHJ4 632 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 FANCGO15287 622 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 LCMT2O60294 686 aaKnown RBP11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 CBX6O95503 412 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 CELA2AP08217 269 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 SOX11P35716 441 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 SLC12A2P55011 1212 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 RGS1Q08116 209 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 ILF2Q12905 390 aaKnown RBP11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 PWP1Q13610 501 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 CSHL1Q14406 222 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZNF460Q14592 562 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 PPP1R3AQ16821 1122 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZXDCQ2QGD7 858 aaPredicted RBP11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 FAM180AQ6UWF9 173 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 FRA10AC1Q70Z53 315 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 ADAMTSL2Q86TH1 951 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 PDSS2Q86YH6 399 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 PYROXD1Q8WU10 500 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 ANKRD7Q92527 254 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 NEIL2Q969S2 332 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 MAGEB10Q96LZ2 347 aaPredicted RBP11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR4K3Q96R72 315 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 BARD1Q99728 777 aaKnown RBP11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 EGFL8Q99944 293 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 DPH5Q9H2P9 285 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 RHOJQ9H4E5 214 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 GPAMQ9HCL2 828 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 TXNDC16Q9P2K2 825 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 TEKT2Q9UIF3 430 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 IKZF3Q9UKT9 509 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 NAALAD2Q9Y3Q0 740 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 SLC22A7Q9Y694 548 aa11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
CTDNEP1-205ENST00000570828 ANKRD12Q6UB98 2062 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 SHANK1Q9Y566 2161 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 TRAV17A0A0B4J275 112 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 CDC7O00311 574 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 SEC24DO94855 1032 aaPredicted RBP11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 ITGAMP11215 1152 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 AGTR2P50052 363 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 EFNA3P52797 238 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 TAS2R39P59534 338 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 MRPS25P82663 173 aaKnown RBP11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 GUCA2AQ02747 115 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 CATSPEREQ5SY80 951 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 NIPAL1Q6NVV3 410 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 TMEM207Q6UWW9 146 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 ABHD13Q7L211 337 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 MAATS1Q7Z4T9 603 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 CPEB2Q7Z5Q1 589 aaKnown RBP11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 TMPRSS11BQ86T26 416 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 THOC6Q86W42 341 aaKnown RBP11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 ST6GALNAC3Q8NDV1 305 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZNF740Q8NDX6 193 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR4K1Q8NGD4 311 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR1N1Q8NGS0 311 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 GRHL3Q8TE85 626 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 PSMF1Q92530 271 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 CDKL2Q92772 493 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR1F2PQ96R84 312 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 CYTH2Q99418 400 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 AIF1LQ9BQI0 150 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 ERP44Q9BS26 406 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 SARGQ9BW04 601 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 RBCK1Q9BYM8 510 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 PELI2Q9HAT8 420 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 POPDC3Q9HBV1 291 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 SAYSD1Q9NPB0 183 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 WHRNQ9P202 907 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 CTNNAL1Q9UBT7 734 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZFP69BQ9UJL9 534 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 OARD1Q9Y530 152 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 KCNE2Q9Y6J6 123 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 NUP210LQ5VU65 1888 aa11.67□□□□□ -0.54
CTDNEP1-205ENST00000570828 DOPEY1Q5JWR5 2465 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 CCDC88CQ9P219 2028 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 EIF3HO15372 352 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 RAD51CO43502 376 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms