RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ACRV1P26436 265 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 FOLR3P41439 243 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 CCR2P41597 374 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 NPY2RP49146 381 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 RGS19P49795 217 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 PLK1P53350 603 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 SULT2A1Q06520 285 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 SLC20A2Q08357 652 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 ZBTB17Q13105 803 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 NAB1Q13506 487 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 RNPS1Q15287 305 aaKnown RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 LRIT3Q3SXY7 679 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 FBXO43Q4G163 708 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF362Q5T0B9 420 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 AGBL2Q5U5Z8 902 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 ANKRD22Q5VYY1 191 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 KCTD11Q693B1 232 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 RFWD3Q6PCD5 774 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TAOK1Q7L7X3 1001 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 NLRP9Q7RTR0 991 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 MDGA2Q7Z553 956 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 CCDC91Q7Z6B0 441 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 ADGRD2Q7Z7M1 963 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 RBM23Q86U06 439 aaKnown RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 GPAT4Q86UL3 456 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TDRPQ86YL5 185 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 KLBQ86Z14 1044 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 PALM2Q8IXS6 379 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 ARFGAP2Q8N6H7 521 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 FBXO36Q8NEA4 188 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 FIBINQ8TAL6 211 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 FAM110DQ8TAY7 271 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 Q8TCH9 128 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 DDI1Q8WTU0 396 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 PABPC5Q96DU9 382 aaKnown RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 IMP4Q96G21 291 aaKnown RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 AGAP3Q96P47 875 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TEFMQ96QE5 360 aaKnown RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 PSKH2Q96QS6 385 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 CYTH2Q99418 400 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 C10orf88Q9H8K7 445 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 Q9N2J8 555 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 RBM22Q9NW64 420 aaKnown RBP eCLIP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 DLL3Q9NYJ7 618 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 NINJ2Q9NZG7 142 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 SENP1Q9P0U3 644 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 UBA2Q9UBT2 640 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 DKK2Q9UBU2 259 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 SLC24A2Q9UI40 661 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TEX264Q9Y6I9 313 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 DENND4AQ7Z401 1863 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 C2orf16Q68DN1 1984 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SHROOM3Q8TF72 1996 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 EXOC1LA0A1B0GW35 172 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 OR2A25A4D2G3 310 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 RASGRF2O14827 1237 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 ACSL3O95573 720 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 AGTP01019 485 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 IL1AP01583 271 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 EPOP01588 193 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 HLA-DQB2P05538 268 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SRPRAP08240 638 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SERPINF2P08697 491 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 FCGR2AP12318 317 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 APEHP13798 732 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SLC2A4P14672 509 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 CEBPBP17676 345 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 PGAM1P18669 254 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 HLA-DPA1P20036 260 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SP100P23497 879 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 FPR3P25089 353 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 HOXD9P28356 352 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 PCSK6P29122 969 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 MTHFRP42898 656 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF84P51523 738 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 F2RL1P55085 397 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 EEFSECP57772 596 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 RPS24P62847 133 aaKnown RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 TP53BP2Q13625 1128 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 PDGFRLQ15198 375 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 ADIPOQQ15848 244 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 KRT71Q3SY84 523 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 CEP85LQ5SZL2 805 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 KIAA0930Q6ICG6 404 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-222ENST00000570139 ANKRD54Q6NXT1 300 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 PET117Q6UWS5 81 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 PRUNE1Q86TP1 453 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 BBS7Q8IWZ6 715 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 CARNMT1Q8N4J0 409 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 DNAAF3Q8N9W5 541 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 WFIKKN2Q8TEU8 576 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 DUSP19Q8WTR2 217 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 DEPDC1BQ8WUY9 529 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 CDKL2Q92772 493 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 SMARCD2Q92925 531 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 PEX13Q92968 403 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 TCEAL4Q96EI5 215 aa6.9□□□□□ -1.3
CNOT1-222ENST00000570139 STAMBPL1Q96FJ0 436 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms