RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 SMYD2Q9NRG4 433 aa11.54□□□□□ -0.56
GTF3C1-208ENST00000567843 SLC5A6Q9Y289 635 aa11.54□□□□□ -0.56
GTF3C1-208ENST00000567843 LRRTM2O43300 516 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 B4GALT2O60909 372 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 CLDN1O95832 211 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 LDLRP01130 860 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ZNF888P0CJ79 500 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 CCND1P24385 295 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 GDF5P43026 501 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 TNFSF10P50591 281 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 AP1S2P56377 157 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 KCNK10P57789 538 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 RAB8AP61006 207 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 RBBP5Q15291 538 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 TSNQ15631 228 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 FBXO48Q5FWF7 155 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ABHD17BQ5VST6 288 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 SBSNQ6UWP8 590 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ANKRD37Q7Z713 158 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 GALNT7Q86SF2 657 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 TMPRSS11BQ86T26 416 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 THOC6Q86W42 341 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ZC3HC1Q86WB0 502 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 CEP97Q8IW35 865 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ZBED8Q8IZ13 594 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ST6GALNAC3Q8NDV1 305 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ABHD11Q8NFV4 315 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 RUNDC3BQ96NL0 473 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 TUBB6Q9BUF5 446 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 RHBGQ9H310 441 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 CAB39LQ9H9S4 337 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 OLAHQ9NV23 265 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 ANKRD10Q9NXR5 420 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 STMN3Q9NZ72 180 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 SLC22A14Q9Y267 594 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 MTO1Q9Y2Z2 717 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 DYRK1BQ9Y463 629 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 TEX15Q9BXT5 2789 aa11.53□□□□□ -0.56
GTF3C1-208ENST00000567843 TRAV17A0A0B4J275 112 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 A0A1W2PQ72 361 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 TRBC2A0A5B9 178 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 NCF1BA6NI72 391 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 NCF1CA8MVU1 366 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 CXorf49A8MYA2 514 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 CCDC188H7C350 402 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 CHST10O43529 356 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 MAN1A2O60476 641 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 WISP2O76076 250 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 DDAH2O95865 285 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 NCF1P14598 390 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 ZNF37AP17032 561 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 ALOX12P18054 663 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 SSTR1P30872 391 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 SCTRP47872 440 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 PMP22Q01453 160 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 ACTN3Q08043 901 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 C2orf54Q08AI8 447 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 ABRAXAS2Q15018 415 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 NSDHLQ15738 373 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 PPP1R3AQ16821 1122 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 SFT2D3Q587I9 215 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 CYP4X1Q8N118 509 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 ANKRD53Q8N9V6 530 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 OR4K1Q8NGD4 311 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 ATL1Q8WXF7 558 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 ANP32BQ92688 251 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 HAS2Q92819 552 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 LRRC39Q96DD0 335 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 KLHL31Q9H511 634 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 KCNK13Q9HB14 408 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 SAYSD1Q9NPB0 183 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 MOCS1Q9NZB8 636 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 CTNNAL1Q9UBT7 734 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 C19orf25Q9UFG5 118 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 CORO1CQ9ULV4 474 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 SLC22A7Q9Y694 548 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 SCN2AQ99250 2005 aa11.52□□□□□ -0.57
GTF3C1-208ENST00000567843 A0A0G2JN53 185 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 A8MUA0 341 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 FAM227AF5H4B4 570 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 PHGDHO43175 533 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 GALR3O60755 368 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 ENO2P09104 434 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 ICAM2P13598 275 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 EDN3P14138 238 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 GMPRP36959 345 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 RHAGQ02094 409 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 RGS1Q08116 209 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 HERC3Q15034 1050 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 C1QL3Q5VWW1 255 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 PAPD4Q6PIY7 484 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 NXPE4Q6UWF7 544 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 RIPOR1Q6ZS17 1223 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 BEST3Q8N1M1 668 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 NKAPQ8N5F7 415 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 BCORP1Q8N888 145 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 PYROXD1Q8WU10 500 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 ESAMQ96AP7 390 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms