RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ACANP16112 2415 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 LCMT2O60294 686 aaKnown RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 CDC40O60508 579 aaKnown RBP eCLIP14.53□□□□□ -0.08
PALB2-205ENST00000567003 AVILO75366 819 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 TPOP07202 933 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 OGNP20774 298 aaKnown RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 NR0B1P51843 470 aaKnown RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 ART1P52961 327 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 ITGA8P53708 1063 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 ADARP55265 1226 aaKnown RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 TAS2R50P59544 299 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 SIX1Q15475 284 aaPredicted RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 KRTAP21-3Q3LHN1 58 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 ZNF549Q6P9A3 640 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 CYHR1Q6ZMK1 362 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 UBE2R2Q712K3 238 aaPredicted RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 RPS19BP1Q86WX3 136 aaKnown RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 CILP2Q8IUL8 1156 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 RPRMLQ8N4K4 120 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 FBXO15Q8NCQ5 510 aaPredicted RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 ASB11Q8WXH4 323 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 ALKBH8Q96BT7 664 aaKnown RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 TM4SF19Q96DZ7 209 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 TCF12Q99081 682 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 FRMD8P1Q9BZ68 369 aaPredicted RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 CCDC177Q9NQR7 707 aaPredicted RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 TMEM184CQ9NVA4 438 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 VPS13CQ709C8 3753 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 ZNF407Q9C0G0 2248 aa14.53□□□□□ -0.08
PALB2-205ENST00000567003 PRRC2AP48634 2157 aaKnown RBP14.53□□□□□ -0.08
PALB2-205ENST00000567003 ANKHD1Q8IWZ3 2542 aaKnown RBP14.52□□□□□ -0.08
PALB2-205ENST00000567003 DNAJC13O75165 2243 aa14.52□□□□□ -0.08
PALB2-205ENST00000567003 A0A1B0GTH9 108 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 GFYI3L273 518 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 FANCGO15287 622 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 KIF5CO60282 957 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 NADKO95544 446 aaPredicted RBP14.52□□□□□ -0.09
PALB2-205ENST00000567003 MPC1LP0DKB6 136 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 IGFBP2P18065 325 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 SKIV2L2P42285 1042 aaKnown RBP14.52□□□□□ -0.09
PALB2-205ENST00000567003 MEOX1P50221 254 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 KIF5AQ12840 1032 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 TTLL9Q3SXZ7 439 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 MEI1Q5TIA1 1274 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 ZNF470Q6ECI4 717 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 KIAA0930Q6ICG6 404 aaPredicted RBP14.52□□□□□ -0.09
PALB2-205ENST00000567003 NEPROQ6NW34 567 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 ASPGQ86U10 573 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 DENND6AQ8IWF6 608 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 CPNE9Q8IYJ1 553 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 CYP4X1Q8N118 509 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 HORMAD2Q8N7B1 307 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 CAMKVQ8NCB2 501 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 PLPP5Q8NEB5 264 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 FAM57AQ8TBR7 257 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 ELP5Q8TE02 316 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 GPR21Q99679 349 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 OLFM1Q99784 485 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 COQ3Q9NZJ6 369 aa14.52□□□□□ -0.09
PALB2-205ENST00000567003 DRG1Q9Y295 367 aaKnown RBP14.52□□□□□ -0.09
PALB2-205ENST00000567003 KCNE1BA0A087WTH5 132 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 CTAGE9A4FU28 777 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 MAGEB17A8MXT2 336 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 TFECO14948 347 aaPredicted RBP14.51□□□□□ -0.09
PALB2-205ENST00000567003 PFDN6O15212 129 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 HS6ST1O60243 411 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 B4GALT2O60909 372 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 FHP07954 510 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 CDH1P12830 882 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 PTGS2P35354 604 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 KCNJ1P48048 391 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 ZNF75DP51815 510 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 MEF2AQ02078 507 aaPredicted RBP14.51□□□□□ -0.09
PALB2-205ENST00000567003 CTBP1Q13363 440 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 PCGF5Q86SE9 256 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 CCDC71Q8IV32 467 aaPredicted RBP14.51□□□□□ -0.09
PALB2-205ENST00000567003 SLC13A3Q8WWT9 602 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 ATG10Q9H0Y0 220 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 ADAMTS6Q9UKP5 1117 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 RNF6Q9Y252 685 aa14.51□□□□□ -0.09
PALB2-205ENST00000567003 A8MUA0 341 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 ZBTB14O43829 449 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 CYB561P49447 251 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 MLF1P58340 268 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 BTG2P78543 158 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 TFF3Q07654 80 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 RPS6KA1Q15418 735 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 TRIP13Q15645 432 aaPredicted RBP14.5□□□□□ -0.09
PALB2-205ENST00000567003 CAPN13Q6MZZ7 669 aaPredicted RBP14.5□□□□□ -0.09
PALB2-205ENST00000567003 CASC4Q6P4E1 433 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 TMEM200AQ86VY9 491 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 TMEM139Q8IV31 216 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 LGI4Q8N135 537 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 ZNF740Q8NDX6 193 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 CD200R1Q8TD46 325 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 ZNF669Q96BR6 464 aaPredicted RBP14.5□□□□□ -0.09
PALB2-205ENST00000567003 THAP11Q96EK4 314 aa14.5□□□□□ -0.09
PALB2-205ENST00000567003 INTS10Q9NVR2 710 aaKnown RBP14.5□□□□□ -0.09
PALB2-205ENST00000567003 CHST10O43529 356 aa14.49□□□□□ -0.09
PALB2-205ENST00000567003 PDE9AO76083 593 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms