RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 PCDH1Q08174 1060 aa13□□□□□ -0.33
SPG7-215ENST00000566682 LAPTM5Q13571 262 aa13□□□□□ -0.33
SPG7-215ENST00000566682 GTF2H2Q13888 395 aa13□□□□□ -0.33
SPG7-215ENST00000566682 E2F2Q14209 437 aa13□□□□□ -0.33
SPG7-215ENST00000566682 TBCCQ15814 346 aa13□□□□□ -0.33
SPG7-215ENST00000566682 NKG7Q16617 165 aa13□□□□□ -0.33
SPG7-215ENST00000566682 UGT8Q16880 541 aa13□□□□□ -0.33
SPG7-215ENST00000566682 GTF2H2CQ6P1K8 395 aa13□□□□□ -0.33
SPG7-215ENST00000566682 METTL2BQ6P1Q9 378 aaKnown RBP13□□□□□ -0.33
SPG7-215ENST00000566682 PRSS41Q7RTY9 318 aa13□□□□□ -0.33
SPG7-215ENST00000566682 TMEM151BQ8IW70 566 aa13□□□□□ -0.33
SPG7-215ENST00000566682 RIBC1Q8N443 379 aaPredicted RBP13□□□□□ -0.33
SPG7-215ENST00000566682 OR9A4Q8NGU2 314 aa13□□□□□ -0.33
SPG7-215ENST00000566682 ZCCHC10Q8TBK6 192 aa13□□□□□ -0.33
SPG7-215ENST00000566682 NT5CQ8TCD5 201 aa13□□□□□ -0.33
SPG7-215ENST00000566682 CREB3L4Q8TEY5 395 aa13□□□□□ -0.33
SPG7-215ENST00000566682 TTC9Q92623 222 aa13□□□□□ -0.33
SPG7-215ENST00000566682 EXTL1Q92935 676 aa13□□□□□ -0.33
SPG7-215ENST00000566682 CATSPER2Q96P56 530 aa13□□□□□ -0.33
SPG7-215ENST00000566682 EFCAB11Q9BUY7 163 aa13□□□□□ -0.33
SPG7-215ENST00000566682 ROPN1BQ9BZX4 212 aaPredicted RBP13□□□□□ -0.33
SPG7-215ENST00000566682 PITHD1Q9GZP4 211 aaPredicted RBP13□□□□□ -0.33
SPG7-215ENST00000566682 SLC26A1Q9H2B4 701 aa13□□□□□ -0.33
SPG7-215ENST00000566682 ROPN1Q9HAT0 212 aaPredicted RBP13□□□□□ -0.33
SPG7-215ENST00000566682 ZNF490Q9ULM2 529 aaPredicted RBP13□□□□□ -0.33
SPG7-215ENST00000566682 PLAAQ9Y263 795 aa13□□□□□ -0.33
SPG7-215ENST00000566682 SLC22A7Q9Y694 548 aa13□□□□□ -0.33
SPG7-215ENST00000566682 ANKDD1BA6NHY2 528 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 A8MT66 165 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 PRPF4O43172 522 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■□□□□ 10.4
SPG7-215ENST00000566682 GLRA3O75311 464 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 NSA2O95478 260 aaKnown RBP12.99□□□□□ -0.33
SPG7-215ENST00000566682 ITGB2P05107 769 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 SERPINA6P08185 405 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 TAC1P20366 129 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 FBLP22087 321 aaKnown RBP12.99□□□□□ -0.33
SPG7-215ENST00000566682 FOLR3P41439 243 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 HYAL2Q12891 473 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 SSPNQ14714 243 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 TBR1Q16650 682 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 HIST2H2ACQ16777 129 aaPredicted RBP12.99□□□□□ -0.33
SPG7-215ENST00000566682 SYT16Q17RD7 645 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 DEFB109BQ30KR1 87 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 VWA2Q5GFL6 755 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 PAGE2BQ5JRK9 111 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 HIST2H2AA3Q6FI13 130 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 GOLGA7Q7Z5G4 137 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPG7-215ENST00000566682 AMER3Q8N944 861 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 TTLQ8NG68 377 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 OR2Y1Q8NGV0 311 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 STT3BQ8TCJ2 826 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 ADAMTS17Q8TE56 1095 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 SPSB2Q99619 263 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 YIPF2Q9BWQ6 316 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 IPPKQ9H8X2 491 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 WDR54Q9H977 334 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 ANKHQ9HCJ1 492 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 CTSFQ9UBX1 484 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 ZNF282Q9UDV7 671 aaPredicted RBP12.99□□□□□ -0.33
SPG7-215ENST00000566682 POLHQ9Y253 713 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 MAP4K5Q9Y4K4 846 aa12.99□□□□□ -0.33
SPG7-215ENST00000566682 SCN2AQ99250 2005 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 IGLV3-12A0A075B6K2 115 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 URADA6NGE7 173 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 VSTM2BA6NLU5 285 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 H0YIG0 161 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 FFAR3O14843 346 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 GPR42O15529 346 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 DLX3O60479 287 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 UMODP07911 640 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 ALOX12P18054 663 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 KRT4P19013 534 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 GSTM2P28161 218 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 HNF4AP41235 474 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 CCT5P48643 541 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 PIK3CGP48736 1102 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
SPG7-215ENST00000566682 OCA2Q04671 838 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 SLC18A2Q05940 514 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 HERC3Q15034 1050 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 ADNP2Q6IQ32 1131 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 SHISA6Q6ZSJ9 500 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 VN1R5Q7Z5H4 357 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 AFAP1L2Q8N4X5 818 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 UTP15Q8TED0 518 aaKnown RBP12.98□□□□□ -0.33
SPG7-215ENST00000566682 CCT6BQ92526 530 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 MIEF2Q96C03 454 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 SEC16BQ96JE7 1060 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 SLC6A16Q9GZN6 736 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 AICDAQ9GZX7 198 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 KLHL31Q9H511 634 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 SOX17Q9H6I2 414 aaPredicted RBP12.98□□□□□ -0.33
SPG7-215ENST00000566682 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 LGALS13Q9UHV8 139 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 NXT1Q9UKK6 140 aaKnown RBP12.98□□□□□ -0.33
SPG7-215ENST00000566682 PCTPQ9UKL6 214 aa12.98□□□□□ -0.33
SPG7-215ENST00000566682 RALYQ9UKM9 306 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms