RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CTNNAL1Q9UBT7 734 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 SEC14L3Q9UDX4 400 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 CORO1CQ9ULV4 474 aaPredicted RBP6.05□□□□□ -1.44
TCF4-228ENST00000565393 SLC22A14Q9Y267 594 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 SNX24Q9Y343 169 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 TEX264Q9Y6I9 313 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 KCNE2Q9Y6J6 123 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 MGAQ8IWI9 3026 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
TCF4-228ENST00000565393 ZNF106Q9H2Y7 1883 aaKnown RBP6.05□□□□□ -1.44
TCF4-228ENST00000565393 COL6A6A6NMZ7 2263 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 FAM95CA0A1B0GW59 222 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 A0A1W2PQ72 361 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 NCF1BA6NI72 391 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 USP27XA6NNY8 438 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 A8MUA0 341 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 NCF1CA8MVU1 366 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 MAGEB17A8MXT2 336 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 FAM227AF5H4B4 570 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 CCDC188H7C350 402 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 PSMD12O00232 456 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 CCL21O00585 134 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 NDC80O14777 642 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 GALR3O60755 368 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 ZG16O60844 167 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 PIAS1O75925 651 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 TSPAN12O95859 305 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 FHP07954 510 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 CYC1P08574 325 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 ZNF888P0CJ79 500 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 C1GALT1C1LP0DN25 315 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 ESRRAP11474 423 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 NCF1P14598 390 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 CD46P15529 392 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 DCTP40126 519 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 CD96P40200 585 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 GDF5P43026 501 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 EFNA3P52797 238 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 CASP6P55212 293 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 TAS2R39P59534 338 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 TAS2R50P59544 299 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 SKP1P63208 163 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 BTG2P78543 158 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 MRPS25P82663 173 aaKnown RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 RBPJQ06330 500 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 CALCOCO2Q13137 446 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 MAPKAPK3Q16644 382 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 ZXDCQ2QGD7 858 aaPredicted RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 NIPAL1Q6NVV3 410 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 PAPD4Q6PIY7 484 aaKnown RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 NXPE4Q6UWF7 544 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 CAPN12Q6ZSI9 719 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 GALNT7Q86SF2 657 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 PDSS2Q86YH6 399 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 CRLF3Q8IUI8 442 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 ZBED8Q8IZ13 594 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 SPATA6LQ8N4H0 392 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 SLC5A8Q8N695 610 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 HORMAD2Q8N7B1 307 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 BBOF1Q8ND07 529 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 PLPP5Q8NEB5 264 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 ARMC2Q8NEN0 867 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 TRPV3Q8NET8 790 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 NT5CQ8TCD5 201 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 PYROXD1Q8WU10 500 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 NR4A3Q92570 626 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 FAR2Q96K12 515 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 OR4K3Q96R72 315 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 OR1F2PQ96R84 312 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 KRT12Q99456 494 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 AIF1LQ9BQI0 150 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 UNKQ9C0B0 810 aaKnown RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 RNF32Q9H0A6 362 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 DPH5Q9H2P9 285 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 KCNF1Q9H3M0 494 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 KLHL31Q9H511 634 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 PLAC1Q9HBJ0 212 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 GPAMQ9HCL2 828 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 COPG2Q9UBF2 871 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 SH3BGRL2Q9UJC5 107 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 ZFP69BQ9UJL9 534 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 IKZF3Q9UKT9 509 aa6.04□□□□□ -1.44
TCF4-228ENST00000565393 MTO1Q9Y2Z2 717 aaKnown RBP6.04□□□□□ -1.44
TCF4-228ENST00000565393 LOC400499M0QZD8 3231 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 ARHGAP10A1A4S6 786 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 NPEPPSL1A6NEC2 478 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 ANKDD1BA6NHY2 528 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 PRSS44E7EML9 344 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 CLDN4O14493 209 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 CLGNO14967 610 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 MAN1A2O60476 641 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 WDR47O94967 919 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 SEC31AO94979 1220 aaKnown RBP6.03□□□□□ -1.44
TCF4-228ENST00000565393 MLYCDO95822 493 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 STSP08842 583 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 RNH1P13489 461 aaKnown RBP6.03□□□□□ -1.44
TCF4-228ENST00000565393 GNAZP19086 355 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 MAOAP21397 527 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 MST1P26927 711 aa6.03□□□□□ -1.44
TCF4-228ENST00000565393 EEF1DP29692 281 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms