RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 SMIM10L1P0DMW3 83 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 HIST1H2ADP20671 130 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 CCND1P24385 295 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 GDF5P43026 501 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 SCTRP47872 440 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 AVPR1BP47901 424 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 TNFSF10P50591 281 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 CCR8P51685 355 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 TSNQ15631 228 aaKnown RBP13.87□□□□□ -0.19
USB1-210ENST00000565151 ZNF324BQ6AW86 544 aaPredicted RBP13.87□□□□□ -0.19
USB1-210ENST00000565151 FCRLBQ6BAA4 426 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 CPEB2Q7Z5Q1 589 aaKnown RBP13.87□□□□□ -0.19
USB1-210ENST00000565151 ANKRD37Q7Z713 158 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 THOC6Q86W42 341 aaKnown RBP13.87□□□□□ -0.19
USB1-210ENST00000565151 ZBED8Q8IZ13 594 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 SSC4DQ8WTU2 575 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 SLC5A11Q8WWX8 675 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 TSLPQ969D9 159 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 PEX11GQ96HA9 241 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 SMIM10Q96HG1 83 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 VPS39Q96JC1 886 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 HIST1H2AHQ96KK5 128 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 HIST1H2AJQ99878 128 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 ERP44Q9BS26 406 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 HAUS8Q9BT25 410 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 H2AFJQ9BTM1 129 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 LRRC4CQ9HCJ2 640 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 ZFATQ9P243 1243 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 PLEKHB1Q9UF11 243 aaPredicted RBP13.87□□□□□ -0.19
USB1-210ENST00000565151 SLC22A7Q9Y694 548 aa13.87□□□□□ -0.19
USB1-210ENST00000565151 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
USB1-210ENST00000565151 A1L4Q6 167 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 TAPBPO15533 448 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 NDUFS4O43181 175 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 GALR3O60755 368 aaPredicted RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 CDC123O75794 336 aaPredicted RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 CLDN1O95832 211 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 TBX6O95947 436 aaPredicted RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 ENO2P09104 434 aaPredicted RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 ZNF888P0CJ79 500 aaPredicted RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 CXCR2P25025 360 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 VARSP26640 1264 aaKnown RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 PAFAH1B1P43034 410 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 SLC6A12P48065 614 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 KCNC1P48547 511 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 REEP5Q00765 189 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 CDC16Q13042 620 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 TLR1Q15399 786 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 MINDY4Q4G0A6 757 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 FBXO48Q5FWF7 155 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 H3F3CQ6NXT2 135 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 ZDHHC24Q6UX98 284 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 KLHDC8AQ8IYD2 350 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 OR1N1Q8NGS0 311 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 GABPB2Q8TAK5 448 aaPredicted RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 NT5CQ8TCD5 201 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 UTP15Q8TED0 518 aaKnown RBP13.86□□□□□ -0.19
USB1-210ENST00000565151 CREB3L4Q8TEY5 395 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 FAR1Q8WVX9 515 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 HAS2Q92819 552 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 SLC29A3Q9BZD2 475 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 SLC6A16Q9GZN6 736 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 RHOJQ9H4E5 214 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 EPS8L2Q9H6S3 715 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 ANKHQ9HCJ1 492 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 SAYSD1Q9NPB0 183 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 RIC8BQ9NVN3 520 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 RNF14Q9UBS8 474 aa13.86□□□□□ -0.19
USB1-210ENST00000565151 PCNX1Q96RV3 2341 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 TCRBV9S1A1TA0A576 114 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 FAM155BO75949 473 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 COL8A1P27658 744 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 TDGF1P3P51864 188 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 OR4D1Q15615 310 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 DEFB134Q4QY38 66 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 UBAP2Q5T6F2 1119 aaKnown RBP13.85□□□□□ -0.19
USB1-210ENST00000565151 IRAK1BP1Q5VVH5 260 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 ADNP2Q6IQ32 1131 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 RPUSD3Q6P087 351 aaKnown RBP13.85□□□□□ -0.19
USB1-210ENST00000565151 NXPE4Q6UWF7 544 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 RIPOR1Q6ZS17 1223 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 ST6GALNAC3Q8NDV1 305 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 PLPP5Q8NEB5 264 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 ANKRD7Q92527 254 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 RHBDF1Q96CC6 855 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 SLX1AQ9BQ83 275 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 TMEM79Q9BSE2 394 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 TUBB6Q9BUF5 446 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 WHRNQ9P202 907 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 ZFP69BQ9UJL9 534 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 OARD1Q9Y530 152 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 ITPR2Q14571 2701 aa13.85□□□□□ -0.19
USB1-210ENST00000565151 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
USB1-210ENST00000565151 FAM159BA6NKW6 160 aa13.84□□□□□ -0.19
USB1-210ENST00000565151 FAM227AF5H4B4 570 aa13.84□□□□□ -0.19
USB1-210ENST00000565151 PHGDHO43175 533 aaKnown RBP13.84□□□□□ -0.19
USB1-210ENST00000565151 CHST10O43529 356 aa13.84□□□□□ -0.19
USB1-210ENST00000565151 SLC35G6P0C7Q6 338 aa13.84□□□□□ -0.19
USB1-210ENST00000565151 ALOX12P18054 663 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms