RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LPAR4Q99677 370 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 KCNK13Q9HB14 408 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 NSMCE4AQ9NXX6 385 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 HCN3Q9P1Z3 774 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ZFP69BQ9UJL9 534 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 TEX264Q9Y6I9 313 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 CREBBPQ92793 2442 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 ITPR2Q14571 2701 aa11.49□□□□□ -0.57
GTF3C1-204ENST00000564664 A8MUI8 341 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 CCDC188H7C350 402 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 GALR3O60755 368 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 SEC24DO94855 1032 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 MLYCDO95822 493 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 DCTP40126 519 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 SCTRP47872 440 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 EFNA3P52797 238 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 TAS2R50P59544 299 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 RHAGQ02094 409 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 RBPJQ06330 500 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 ZNF33BQ06732 778 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 MGAT5Q09328 741 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 ZXDCQ2QGD7 858 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 TMEM207Q6UWW9 146 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 GFRALQ6UXV0 394 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 MBOAT1Q6ZNC8 495 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 PRSS41Q7RTY9 318 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 PDSS2Q86YH6 399 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 CREG2Q8IUH2 290 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 SLC5A8Q8N695 610 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 BBOF1Q8ND07 529 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 TBC1D20Q96BZ9 403 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 SEC16BQ96JE7 1060 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 OR4K3Q96R72 315 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 MACROD1Q9BQ69 325 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 AIF1LQ9BQI0 150 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 UTP23Q9BRU9 249 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 RUBCNLQ9H714 662 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 PELI2Q9HAT8 420 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 PLAC1Q9HBJ0 212 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 LANCL2Q9NS86 450 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 MOCS1Q9NZB8 636 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 ZFATQ9P243 1243 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 SH2B3Q9UQQ2 575 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 DYRK1BQ9Y463 629 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 KCNE2Q9Y6J6 123 aa11.48□□□□□ -0.57
GTF3C1-204ENST00000564664 SCN3AQ9NY46 2000 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 NDUFS4O43181 175 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 CHST10O43529 356 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 H2AFYO75367 372 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 RDH16O75452 317 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 BANF1O75531 89 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 STATHP02808 62 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 FHP07954 510 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 CELA2AP08217 269 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 CD46P15529 392 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 ABRAXAS2Q15018 415 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 KRTCAP3Q53RY4 240 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 SFT2D3Q587I9 215 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 ZNF766Q5HY98 468 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 NXPE4Q6UWF7 544 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 SBSNQ6UWP8 590 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 LANCL3Q6ZV70 420 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 ZNF740Q8NDX6 193 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 TTLQ8NG68 377 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 ZCCHC10Q8TBK6 192 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 NEIL2Q969S2 332 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 PYCR2Q96C36 320 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 CFAP36Q96G28 342 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 PEX11GQ96HA9 241 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 VPS39Q96JC1 886 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 CAPS2Q9BXY5 557 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 PITHD1Q9GZP4 211 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 GRPEL1Q9HAV7 217 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 POPDC3Q9HBV1 291 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 TRMT1Q9NXH9 659 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 SUCOQ9UBS9 1254 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 SEC14L3Q9UDX4 400 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 CHMP2BQ9UQN3 213 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 MYO7BQ6PIF6 2116 aa11.47□□□□□ -0.57
GTF3C1-204ENST00000564664 IGHV3-20A0A0C4DH32 117 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SYNDIG1LA6NDD5 238 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 TTI1O43156 1089 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 PRMT3O60678 531 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SEC31AO94979 1220 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 GUCA1CO95843 209 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SERPINA6P08185 405 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SMIM10L1P0DMW3 83 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 ZNF37AP17032 561 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 GSTM2P28161 218 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 HPDP32754 393 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 ITGA8P53708 1063 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 CASP6P55212 293 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 OR4D2P58180 307 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SNRPNP63162 240 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 ART3Q13508 389 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 USP10Q14694 798 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 CATSPEREQ5SY80 951 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 TRMT10BQ6PF06 316 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms