RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 RPLP0P05388 317 aaKnown RBP3.76□□□□□ -1.81
UBR1-205ENST00000564540 DNAH10OSP0CZ25 163 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 BTG1P62324 171 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 CAMK2DQ13557 499 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 KIAA0141Q14154 515 aaPredicted RBP3.76□□□□□ -1.81
UBR1-205ENST00000564540 EIPR1Q53HC9 387 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 LBHQ53QV2 105 aaPredicted RBP3.76□□□□□ -1.81
UBR1-205ENST00000564540 KRT80Q6KB66 452 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 PRSS55Q6UWB4 352 aaPredicted RBP3.76□□□□□ -1.81
UBR1-205ENST00000564540 PPP1R21Q6ZMI0 780 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 CEACAM19Q7Z692 300 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 AMIGO1Q86WK6 493 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 RNF130Q86XS8 419 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 PHC2Q8IXK0 858 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 C11orf53Q8IXP5 236 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 APCDD1Q8J025 514 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 C1orf147Q96MC9 270 aaPredicted RBP3.76□□□□□ -1.81
UBR1-205ENST00000564540 GDAP1L1Q96MZ0 367 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 ATF6BQ99941 703 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 PLCL2Q9UPR0 1127 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 COLEC10Q9Y6Z7 277 aa3.76□□□□□ -1.81
UBR1-205ENST00000564540 hCG_38984A0A1B0GV85 526 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 A0A1W2PPW3 197 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 F8VVB4 439 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 F8VWA3 439 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 TRAFD1O14545 582 aaPredicted RBP3.75□□□□□ -1.81
UBR1-205ENST00000564540 PHOX2AO14813 284 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 PRAF2O60831 178 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 IGKV3-15P01624 115 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 YES1P07947 543 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 EPORP19235 508 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 C4BPBP20851 252 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 PIK3R1P27986 724 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 GPR183P32249 361 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
UBR1-205ENST00000564540 CLDN17P56750 224 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 KRBOX4Q5JUW0 171 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 MOXD1Q6UVY6 613 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 NRARPQ7Z6K4 114 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 SPPL2AQ8TCT8 520 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 P2RX5Q93086 422 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 RMDN1Q96DB5 314 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 CCDC28BQ9BUN5 200 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 TXLNGYQ9BZA5 131 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 JPT2Q9H910 190 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 POLKQ9UBT6 870 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 SPATA31D1Q6ZQQ2 1576 aa3.75□□□□□ -1.81
UBR1-205ENST00000564540 FER1L5A0AVI2 2057 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 A8MU10 97 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 GPRIN2O60269 458 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 HPP00738 406 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 KRTAP1-4P0C5Y4 121 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 ERCC2P18074 760 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 RGS7P49802 495 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 KHKP50053 298 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 ERVK-16P61578 105 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 RASA2Q15283 850 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 TAZQ16635 292 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 UPP1Q16831 310 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 FAM166AQ6J272 317 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 SUMF1Q8NBK3 374 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 OR9Q2Q8NGE9 314 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 TYMSOSQ8TAI1 123 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 NSMAFQ92636 917 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 CASP10Q92851 521 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 NAA11Q9BSU3 229 aaPredicted RBP3.74□□□□□ -1.81
UBR1-205ENST00000564540 IL1RAPQ9NPH3 570 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 KLK11Q9UBX7 282 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 MRPS18CQ9Y3D5 142 aaKnown RBP3.74□□□□□ -1.81
UBR1-205ENST00000564540 LIPGQ9Y5X9 500 aa3.74□□□□□ -1.81
UBR1-205ENST00000564540 ARHGEF33A8MVX0 844 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 TBX10O75333 385 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 RECQL5O94762 991 aaPredicted RBP3.73□□□□□ -1.81
UBR1-205ENST00000564540 CDC25CP30307 473 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 SULT2A1Q06520 285 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 COG2Q14746 738 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 SPANXN4Q5MJ08 99 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 SLC30A6Q6NXT4 461 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 FUT10Q6P4F1 479 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 REG3GQ6UW15 175 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 DHRS11Q6UWP2 260 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 MARCH9Q86YJ5 346 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 VPS33AQ96AX1 596 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 RMDN2Q96LZ7 410 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 UBAC1Q9BSL1 405 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 SLC25A23Q9BV35 468 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 PILRAQ9UKJ1 303 aa3.73□□□□□ -1.81
UBR1-205ENST00000564540 ZNF840PA6NDX5 716 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 A8MXE2 369 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 E5RGE8 158 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 ZNF749O43361 778 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 KIF5CO60282 957 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 LUC7L3O95232 432 aaKnown RBP3.72□□□□□ -1.81
UBR1-205ENST00000564540 PENKP01210 267 aaPredicted RBP3.72□□□□□ -1.81
UBR1-205ENST00000564540 PKLRP30613 574 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 PRELPP51888 382 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 HYAL4Q2M3T9 481 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 LRRC73Q5JTD7 316 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms