RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 WASHC2DQ5SRD0 308 aa15.03■□□□□ -0
RNF40-205ENST00000563909 NEPROQ6NW34 567 aa15.03■□□□□ -0
RNF40-205ENST00000563909 PRMT9Q6P2P2 845 aa15.03■□□□□ -0
RNF40-205ENST00000563909 CD163Q86VB7 1156 aa15.03■□□□□ -0
RNF40-205ENST00000563909 CCDC25Q86WR0 208 aa15.03■□□□□ -0
RNF40-205ENST00000563909 PALM2Q8IXS6 379 aa15.03■□□□□ -0
RNF40-205ENST00000563909 OTUD6BQ8N6M0 293 aa15.03■□□□□ -0
RNF40-205ENST00000563909 TMEM178AQ8NBL3 297 aa15.03■□□□□ -0
RNF40-205ENST00000563909 GOT1L1Q8NHS2 421 aaPredicted RBP15.03■□□□□ -0
RNF40-205ENST00000563909 FAM57AQ8TBR7 257 aa15.03■□□□□ -0
RNF40-205ENST00000563909 SCMH1Q96GD3 660 aa15.03■□□□□ -0
RNF40-205ENST00000563909 IMMP1LQ96LU5 166 aa15.03■□□□□ -0
RNF40-205ENST00000563909 ZNF285Q96NJ3 590 aa15.03■□□□□ -0
RNF40-205ENST00000563909 TCF12Q99081 682 aa15.03■□□□□ -0
RNF40-205ENST00000563909 FMO2Q99518 471 aa15.03■□□□□ -0
RNF40-205ENST00000563909 UTP23Q9BRU9 249 aaKnown RBP15.03■□□□□ -0
RNF40-205ENST00000563909 WDR83Q9BRX9 315 aaKnown RBP15.03■□□□□ -0
RNF40-205ENST00000563909 YIPF2Q9BWQ6 316 aa15.03■□□□□ -0
RNF40-205ENST00000563909 C20orf96Q9NUD7 363 aaPredicted RBP15.03■□□□□ -0
RNF40-205ENST00000563909 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.03■□□□□ -0
RNF40-205ENST00000563909 STOX2Q9P2F5 926 aaPredicted RBP15.03■□□□□ -0
RNF40-205ENST00000563909 MKL2Q9ULH7 1088 aa15.03■□□□□ -0
RNF40-205ENST00000563909 IGLV3-12A0A075B6K2 115 aa15.02■□□□□ -0
RNF40-205ENST00000563909 F8W8V4 182 aa15.02■□□□□ -0
RNF40-205ENST00000563909 RASGRF2O14827 1237 aa15.02■□□□□ -0
RNF40-205ENST00000563909 FFAR3O14843 346 aa15.02■□□□□ -0
RNF40-205ENST00000563909 LIN7AO14910 233 aaPredicted RBP15.02■□□□□ -0
RNF40-205ENST00000563909 GPR42O15529 346 aa15.02■□□□□ -0
RNF40-205ENST00000563909 AP2A2O94973 939 aa15.02■□□□□ -0
RNF40-205ENST00000563909 GSTA2P09210 222 aa15.02■□□□□ -0
RNF40-205ENST00000563909 PTGER1P34995 402 aa15.02■□□□□ -0
RNF40-205ENST00000563909 MAGEA4P43358 317 aa15.02■□□□□ -0
RNF40-205ENST00000563909 VSX2P58304 361 aaPredicted RBP15.02■□□□□ -0
RNF40-205ENST00000563909 FRG1Q14331 258 aaKnown RBP15.02■□□□□ -0
RNF40-205ENST00000563909 FASTKD3Q14CZ7 662 aaKnown RBP15.02■□□□□ -0
RNF40-205ENST00000563909 RNFT1Q5M7Z0 435 aa15.02■□□□□ -0
RNF40-205ENST00000563909 STEAP4Q687X5 459 aa15.02■□□□□ -0
RNF40-205ENST00000563909 GALNTL5Q7Z4T8 443 aa15.02■□□□□ -0
RNF40-205ENST00000563909 TBC1D21Q8IYX1 336 aa15.02■□□□□ -0
RNF40-205ENST00000563909 FAM98AQ8NCA5 519 aaKnown RBP15.02■□□□□ -0
RNF40-205ENST00000563909 GSDMBQ8TAX9 411 aa15.02■□□□□ -0
RNF40-205ENST00000563909 ZNF354BQ96LW1 612 aa15.02■□□□□ -0
RNF40-205ENST00000563909 FAM167BQ9BTA0 163 aa15.02■□□□□ -0
RNF40-205ENST00000563909 ZNF395Q9H8N7 513 aaPredicted RBP15.02■□□□□ -0
RNF40-205ENST00000563909 ENAMQ9NRM1 1142 aa15.02■□□□□ -0
RNF40-205ENST00000563909 RASSF1Q9NS23 344 aa15.02■□□□□ -0
RNF40-205ENST00000563909 TRPC4Q9UBN4 977 aa15.02■□□□□ -0
RNF40-205ENST00000563909 L3MBTL1Q9Y468 752 aa15.02■□□□□ -0
RNF40-205ENST00000563909 GOLGA8KD6RF30 607 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 GOLGA8TH3BQL2 631 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 QSOX1O00391 747 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 NDUFS3O75489 264 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 ZNF24P17028 368 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 ACADLP28330 430 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 HOXC12P31275 282 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 YBX1P67809 324 aaKnown RBP15.01□□□□□ -0.01
RNF40-205ENST00000563909 FASTKQ14296 549 aaKnown RBP15.01□□□□□ -0.01
RNF40-205ENST00000563909 SEMA3AQ14563 771 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 BRD3Q15059 726 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 DEFB113Q30KQ7 82 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 RNF187Q5TA31 235 aaPredicted RBP15.01□□□□□ -0.01
RNF40-205ENST00000563909 FIGLAQ6QHK4 219 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 PACS1Q6VY07 963 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 MICALCLQ6ZW33 695 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 CDC20BQ86Y33 519 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 EIF1ADQ8N9N8 165 aaKnown RBP15.01□□□□□ -0.01
RNF40-205ENST00000563909 MYRIPQ8NFW9 859 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 OR5K2Q8NHB8 316 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 CERS2Q96G23 380 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 TUBB6Q9BUF5 446 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 INTS7Q9NVH2 962 aaKnown RBP15.01□□□□□ -0.01
RNF40-205ENST00000563909 MARCH4Q9P2E8 410 aaPredicted RBP15.01□□□□□ -0.01
RNF40-205ENST00000563909 NFU1Q9UMS0 254 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 VPS9D1Q9Y2B5 631 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 ZANQ9Y493 2812 aa15.01□□□□□ -0.01
RNF40-205ENST00000563909 LOC102723996A0A087X1L8 192 aa15□□□□□ -0.01
RNF40-205ENST00000563909 A0A1B0GTH9 108 aa15□□□□□ -0.01
RNF40-205ENST00000563909 KDM1AO60341 852 aa15□□□□□ -0.01
RNF40-205ENST00000563909 SRPX2O60687 465 aaPredicted RBP15□□□□□ -0.01
RNF40-205ENST00000563909 SP1P08047 785 aa15□□□□□ -0.01
RNF40-205ENST00000563909 ECHS1P30084 290 aa15□□□□□ -0.01
RNF40-205ENST00000563909 DLX5P56178 289 aa15□□□□□ -0.01
RNF40-205ENST00000563909 PMPCAQ10713 525 aa15□□□□□ -0.01
RNF40-205ENST00000563909 TYSND1Q2T9J0 566 aa15□□□□□ -0.01
RNF40-205ENST00000563909 HSP90AA5PQ58FG0 334 aa15□□□□□ -0.01
RNF40-205ENST00000563909 ZNF470Q6ECI4 717 aa15□□□□□ -0.01
RNF40-205ENST00000563909 LDB1Q86U70 411 aaPredicted RBP15□□□□□ -0.01
RNF40-205ENST00000563909 LRRC6Q86X45 466 aa15□□□□□ -0.01
RNF40-205ENST00000563909 CILP2Q8IUL8 1156 aa15□□□□□ -0.01
RNF40-205ENST00000563909 RELL1Q8IUW5 271 aa15□□□□□ -0.01
RNF40-205ENST00000563909 C2orf73Q8N5S3 287 aaPredicted RBP15□□□□□ -0.01
RNF40-205ENST00000563909 LMNTD1Q8N9Z9 388 aa15□□□□□ -0.01
RNF40-205ENST00000563909 SEC16BQ96JE7 1060 aa15□□□□□ -0.01
RNF40-205ENST00000563909 PPANQ9NQ55 473 aaKnown RBP15□□□□□ -0.01
RNF40-205ENST00000563909 IARS2Q9NSE4 1012 aaKnown RBP15□□□□□ -0.01
RNF40-205ENST00000563909 INTS10Q9NVR2 710 aaKnown RBP15□□□□□ -0.01
RNF40-205ENST00000563909 GNPTGQ9UJJ9 305 aa15□□□□□ -0.01
RNF40-205ENST00000563909 PRMT5O14744 637 aaPredicted RBP14.99□□□□□ -0.01
RNF40-205ENST00000563909 EIF2S1P05198 315 aaKnown RBP14.99□□□□□ -0.01
RNF40-205ENST00000563909 OR56A5P0C7T3 313 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms