RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 DEFB134Q4QY38 66 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 ABHD17BQ5VST6 288 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 ANKRD37Q7Z713 158 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 THOC6Q86W42 341 aaKnown RBP16.69■□□□□ 0.26
NME3-205ENST00000563854 BBOF1Q8ND07 529 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 ABHD11Q8NFV4 315 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 PYROXD1Q8WU10 500 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 VPS39Q96JC1 886 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 FAM129AQ9BZQ8 928 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 SAYSD1Q9NPB0 183 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 RNF14Q9UBS8 474 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 CTNNAL1Q9UBT7 734 aa16.69■□□□□ 0.26
NME3-205ENST00000563854 ZNF888P0CJ79 500 aaPredicted RBP16.68■□□□□ 0.26
NME3-205ENST00000563854 HERC3Q15034 1050 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 RBBP5Q15291 538 aaKnown RBP16.68■□□□□ 0.26
NME3-205ENST00000563854 TSNQ15631 228 aaKnown RBP16.68■□□□□ 0.26
NME3-205ENST00000563854 C4orf17Q53FE4 359 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 FCRLBQ6BAA4 426 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 CEP97Q8IW35 865 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 ST6GALNAC3Q8NDV1 305 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 OR4K1Q8NGD4 311 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 ANKRD49Q8WVL7 239 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 FAR1Q8WVX9 515 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 PDLIM5Q96HC4 596 aaKnown RBP16.68■□□□□ 0.26
NME3-205ENST00000563854 IMMP1LQ96LU5 166 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 C5orf34Q96MH7 638 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 BARD1Q99728 777 aaKnown RBP16.68■□□□□ 0.26
NME3-205ENST00000563854 RHOJQ9H4E5 214 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 CAB39LQ9H9S4 337 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 GPAMQ9HCL2 828 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 NSMCE4AQ9NXX6 385 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 MOCS1Q9NZB8 636 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 TXNDC16Q9P2K2 825 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 SLC22A14Q9Y267 594 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 SLC5A6Q9Y289 635 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 SLC22A7Q9Y694 548 aa16.68■□□□□ 0.26
NME3-205ENST00000563854 TRAV17A0A0B4J275 112 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 NCF1BA6NI72 391 aaPredicted RBP16.67■□□□□ 0.26
NME3-205ENST00000563854 NCF1CA8MVU1 366 aaPredicted RBP16.67■□□□□ 0.26
NME3-205ENST00000563854 E2F3O00716 465 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 RAD51CO43502 376 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 WDR47O94967 919 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 DDAH2O95865 285 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 WDPCPO95876 746 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 NCF1P14598 390 aaPredicted RBP16.67■□□□□ 0.26
NME3-205ENST00000563854 ALOX12P18054 663 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 SSTR1P30872 391 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 SCTRP47872 440 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 AGTR2P50052 363 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 TNFSF10P50591 281 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 REEP5Q00765 189 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 ACTN3Q08043 901 aaPredicted RBP16.67■□□□□ 0.26
NME3-205ENST00000563854 PWP1Q13610 501 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 ABRAXAS2Q15018 415 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 C18orf21Q32NC0 220 aaPredicted RBP16.67■□□□□ 0.26
NME3-205ENST00000563854 ABHD13Q7L211 337 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
NME3-205ENST00000563854 BCORP1Q8N888 145 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 SUN3Q8TAQ9 357 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 TSLPQ969D9 159 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 AIF1LQ9BQI0 150 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 PELI2Q9HAT8 420 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 KCNK13Q9HB14 408 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 SMYD2Q9NRG4 433 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 OLAHQ9NV23 265 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 TEKT2Q9UIF3 430 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 ZFP69BQ9UJL9 534 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 OSGIN2Q9Y236 505 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 OARD1Q9Y530 152 aa16.67■□□□□ 0.26
NME3-205ENST00000563854 FAM187AA6NFU0 413 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 GALR3O60755 368 aaPredicted RBP16.66■□□□□ 0.26
NME3-205ENST00000563854 CYC1P08574 325 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 EDN3P14138 238 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 CASQ1P31415 396 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 ST13P50502 369 aaKnown RBP16.66■□□□□ 0.26
NME3-205ENST00000563854 RAB8AP61006 207 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 SKP1P63208 163 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 SPTAN1Q13813 2472 aaKnown RBP16.66■□□□□ 0.26
NME3-205ENST00000563854 NSDHLQ15738 373 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 SFT2D3Q587I9 215 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 PLAG1Q6DJT9 500 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 PAPD4Q6PIY7 484 aaKnown RBP16.66■□□□□ 0.26
NME3-205ENST00000563854 NXPE4Q6UWF7 544 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 MAATS1Q7Z4T9 603 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 ADAMTSL2Q86TH1 951 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 SPATA6LQ8N4H0 392 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 SPATA4Q8NEY3 305 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 NT5CQ8TCD5 201 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 CDKL2Q92772 493 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 HAS2Q92819 552 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 ERP44Q9BS26 406 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 RHBGQ9H310 441 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 MTO1Q9Y2Z2 717 aaKnown RBP16.66■□□□□ 0.26
NME3-205ENST00000563854 KCNE2Q9Y6J6 123 aa16.66■□□□□ 0.26
NME3-205ENST00000563854 CTAGE15A4D2H0 777 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 CXorf49A8MYA2 514 aaPredicted RBP16.65■□□□□ 0.26
NME3-205ENST00000563854 PHGDHO43175 533 aaKnown RBP16.65■□□□□ 0.26
NME3-205ENST00000563854 CHST10O43529 356 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 B4GALT2O60909 372 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 DNAJB6O75190 326 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms