RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 SERPINE1P05121 402 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 ENO1P06733 434 aaKnown RBP12.15□□□□□ -0.46
CDH11-204ENST00000562712 NEFHP12036 1026 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 RGS1Q08116 209 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 FAM53BQ14153 422 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 RCN2Q14257 317 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 ZRSR2Q15696 482 aaKnown RBP12.15□□□□□ -0.46
CDH11-204ENST00000562712 CHI3L2Q15782 390 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 HKDC1Q2TB90 917 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 ARL13AQ5H913 290 aaPredicted RBP12.15□□□□□ -0.46
CDH11-204ENST00000562712 RHBDD2Q6NTF9 364 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 VN1R5Q7Z5H4 357 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDH11-204ENST00000562712 ARHGEF39Q8N4T4 335 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 TTC29Q8NA56 475 aaPredicted RBP12.15□□□□□ -0.46
CDH11-204ENST00000562712 SLC38A9Q8NBW4 561 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 PPP1R14CQ8TAE6 165 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 RAB3IL1Q8TBN0 382 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 WDR20Q8TBZ3 569 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 MGARPQ8TDB4 240 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 AGAP11Q8TF27 550 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 SLC29A3Q9BZD2 475 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 ACTR5Q9H9F9 607 aaPredicted RBP12.15□□□□□ -0.46
CDH11-204ENST00000562712 MID1IP1Q9NPA3 183 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 FOXJ2Q9P0K8 574 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 DKK4Q9UBT3 224 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 SNX6Q9UNH7 406 aa12.15□□□□□ -0.46
CDH11-204ENST00000562712 RUVBL1Q9Y265 456 aaKnown RBP12.15□□□□□ -0.46
CDH11-204ENST00000562712 URADA6NGE7 173 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 TMEM114B3SHH9 223 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 STMND1H3BQB6 276 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 P2RX6O15547 441 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 KIAA0754O94854 1291 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 OR4F21O95013 312 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 SERPIND1P05546 499 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 CAPN1P07384 714 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 FGF4P08620 206 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 PCNAP12004 261 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 ZNF28P17035 718 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 NR1D1P20393 614 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 PTX3P26022 381 aaPredicted RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 STXBP1P61764 594 aaKnown RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 PHEXP78562 749 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 ZNF33BQ06732 778 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 HYAL2Q12891 473 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 IFT88Q13099 833 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 STX3Q13277 289 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 MAP7Q14244 749 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 NDUFA9Q16795 377 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 TBC1D25Q3MII6 688 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 PRAMEF17Q5VTA0 474 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 FRG2Q64ET8 278 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 TMEM214Q6NUQ4 689 aaKnown RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 ZCCHC23Q6ZST2 131 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 TRIM42Q8IWZ5 723 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 CDYL2Q8N8U2 506 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 KCT2Q8NC54 265 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 HUS1BQ8NHY5 278 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 METTL6Q8TCB7 284 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 ZNF473Q8WTR7 871 aaKnown RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 CLIP3Q96DZ5 547 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 MVB12AQ96EY5 273 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 FRG2BQ96QU4 278 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 MACROD1Q9BQ69 325 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 DPH2Q9BQC3 489 aaPredicted RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 SLC7A5P2Q9GIP4 190 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 SLC6A16Q9GZN6 736 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 ELOVL6Q9H5J4 265 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 CCDC86Q9H6F5 360 aaKnown RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 CUTCQ9NTM9 273 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 PPT2Q9UMR5 302 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 SLC22A7Q9Y694 548 aa12.14□□□□□ -0.47
CDH11-204ENST00000562712 MDC1Q14676 2089 aaKnown RBP12.14□□□□□ -0.47
CDH11-204ENST00000562712 SERTM1A2A2V5 107 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 MEN1O00255 615 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 KLF11O14901 512 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 DSCR3O14972 297 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 ULK1O75385 1050 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 DLGAP3O95886 979 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 TBX6O95947 436 aaPredicted RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 KRT6AP02538 564 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 KRT6BP04259 564 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 KLK3P07288 261 aaPredicted RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 CHRNGP07510 517 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CCNYL3P0C7X3 344 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 SMIM10L1P0DMW3 83 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 UROSP10746 265 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CHN1P15882 459 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 BGNP21810 368 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 ALAS2P22557 587 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 RORAP35398 523 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CCR10P46092 362 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 SLC1A6P48664 564 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 KRT6CP48668 564 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 ABCE1P61221 599 aaKnown RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 ABHD18Q0P651 414 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 HERC3Q15034 1050 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms