RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 DPP10Q8N608 796 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
COMMD4-205ENST00000562310 DNAJB8Q8NHS0 232 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 SLC13A3Q8WWT9 602 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 UTP4Q969X6 686 aaKnown RBP13.66□□□□□ -0.22
COMMD4-205ENST00000562310 TMEM74Q96NL1 305 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 HOPXQ9BPY8 73 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-205ENST00000562310 THTPAQ9BU02 230 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 EBPLQ9BY08 206 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 MYNNQ9NPC7 610 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 CROTQ9UKG9 612 aa13.66□□□□□ -0.22
COMMD4-205ENST00000562310 MDC1Q14676 2089 aaKnown RBP13.66□□□□□ -0.22
COMMD4-205ENST00000562310 ARHGAP10A1A4S6 786 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 C9JVG2 144 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 PPM1DO15297 605 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 CAPN5O15484 640 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 NUDT21O43809 227 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 LCMT2O60294 686 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 SH3BGRLO75368 114 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 CER1O95813 267 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 CFIP05156 583 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 DDX5P17844 614 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 TACR1P25103 407 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 S100A3P33764 101 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 TSFMP43897 325 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 CCT8P50990 548 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 NUBP1P53384 320 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 PSME3P61289 254 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 SRSF11Q05519 484 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 RGS1Q08116 209 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 PWP1Q13610 501 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 NFYCQ13952 458 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 TLR1Q15399 786 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 SHBQ15464 509 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ADPRMQ3LIE5 342 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 FAM174BQ3ZCQ3 159 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 C6orf163Q5TEZ5 329 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ZCCHC8Q6NZY4 707 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 RNF44Q7L0R7 432 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ZNF438Q7Z4V0 828 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 R3HCC1LQ7Z5L2 792 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ASPGQ86U10 573 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 TRIM73Q86UV7 250 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 RETREG3Q86VR2 466 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ZNF761Q86XN6 746 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 FAM20CQ8IXL6 584 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ULK2Q8IYT8 1036 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 CLHC1Q8NHS4 586 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 BAHD1Q8TBE0 780 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 NT5CQ8TCD5 201 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 RSC1A1Q92681 617 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 LOXL4Q96JB6 756 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 CD180Q99467 661 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 PRPF18Q99633 342 aaKnown RBP13.65□□□□□ -0.22
COMMD4-205ENST00000562310 RAB33BQ9H082 229 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ABCG4Q9H172 646 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 SEMA6CQ9H3T2 930 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 RMND5AQ9H871 391 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 CAPN10Q9HC96 672 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 SPAG4Q9NPE6 437 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 BAIAP2L1Q9UHR4 511 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 SLC6A14Q9UN76 642 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
COMMD4-205ENST00000562310 ASPDHA6ND91 283 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 LRIT2A6NDA9 550 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SAP18O00422 153 aaKnown RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 PLPP1O14494 284 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SCAMP2O15127 329 aaKnown RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 TBX6O95947 436 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SERPIND1P05546 499 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 PGRP06401 933 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SYPP08247 313 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SLC35G6P0C7Q6 338 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 KIR3DL1P43629 444 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 GPR3P46089 330 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 HNRNPFP52597 415 aaKnown RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 TRA2BP62995 288 aaKnown RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 LRRC74AQ0VAA2 488 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 NR1D2Q14995 579 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SPATS1Q496A3 300 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SPANXN4Q5MJ08 99 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 FCRL6Q6DN72 434 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 C8orf82Q6P1X6 216 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 CAMKMTQ7Z624 323 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 CARFQ8N187 725 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SLC25A45Q8N413 288 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 MINDY1Q8N5J2 469 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 KRTCAP2Q8N6L1 136 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 ZNF655Q8N720 491 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 OR6C4Q8NGE1 309 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 WDR48Q8TAF3 677 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 VPS33AQ96AX1 596 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 MTERF3Q96E29 417 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 SLC45A3Q96JT2 553 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 KCNC2Q96PR1 638 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 F2RL3Q96RI0 385 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms