RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 MTFMTQ96DP5 389 aaKnown RBP21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 SLC41A2Q96JW4 573 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 TRAPPC9Q96Q05 1148 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 CD180Q99467 661 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 AIF1LQ9BQI0 150 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 NRSN2Q9GZP1 204 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 PITHD1Q9GZP4 211 aaPredicted RBP21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 POLR1BQ9H9Y6 1135 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 SAR1AQ9NR31 198 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 MRGBPQ9NV56 204 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 CUEDC1Q9NWM3 386 aaPredicted RBP21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 SIDT1Q9NXL6 827 aaKnown RBP21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 C1QTNF9BB2RNN3 333 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 UBDO15205 165 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 C1QTNF9P0C862 333 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 PRR35P0CG20 571 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 NELFEP18615 380 aaKnown RBP21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 HRH2P25021 359 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 NR6A1Q15406 480 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 OGFOD2Q6N063 350 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 LAS2Q8IYD9 372 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 RNF31Q96EP0 1072 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 PPP3R2Q96LZ3 170 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 APMAPQ9HDC9 416 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 C1GALT1Q9NS00 363 aa21.47■■□□□ 1.03
SYNGR3-202ENST00000562045 DMXL2Q8TDJ6 3036 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 HCRTR1O43613 425 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 NRP2O60462 931 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 BRINP1O60477 761 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 FOLR1P15328 257 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 NEK2P51955 445 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 CSTF3Q12996 717 aaKnown RBP21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 KIAA1614Q5VZ46 1190 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 FAM91A1Q658Y4 838 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 TMEM198Q66K66 360 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 TMIGD1Q6UXZ0 262 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 CCDC121Q6ZUS5 278 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 CHSY3Q70JA7 882 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 OR4K1Q8NGD4 311 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 TSC22D4Q9Y3Q8 395 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 CCL27Q9Y4X3 112 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 H7BY64 318 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 PEX11AO75192 247 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 PCNAP12004 261 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 HSD3B1P14060 373 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 HSD3B2P26439 372 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 MAPK10P53779 464 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 MEF2AQ02078 507 aaPredicted RBP21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 CYP4F3Q08477 520 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 PRAP1Q96NZ9 151 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 CATSPER2Q96P56 530 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 CTRCQ99895 268 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 ACPTQ9BZG2 426 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 SPNS1Q9H2V7 528 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 BRF2Q9HAW0 419 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 FAM60AQ9NP50 221 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 ASCL3Q9NQ33 180 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 ARMCX1Q9P291 453 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 PCDHGA8Q9Y5G5 932 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 AK5Q9Y6K8 562 aa21.46■■□□□ 1.03
SYNGR3-202ENST00000562045 LAMA5O15230 3695 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 HEATR5BQ9P2D3 2071 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 A0A0J9YY10 115 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 LSM1O15116 133 aaKnown RBP21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 RSL1D1O76021 490 aaKnown RBP21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 TNFSF15O95150 251 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 FKBP9O95302 570 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 ZBTB11O95625 1053 aaPredicted RBP21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 JMJD7P0C870 316 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 MAGP20916 626 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 PHEXP78562 749 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 REEP5Q00765 189 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 EIF3IQ13347 325 aaKnown RBP21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 UBAP2LQ14157 1087 aaKnown RBP21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 SLC5A12Q1EHB4 618 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 C6orf136Q5SQH8 315 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 SPATA19Q7Z5L4 167 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 ADCK2Q7Z695 626 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 SLC46A1Q96NT5 459 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 NT5DC2Q9H857 520 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 TMEM184CQ9NVA4 438 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 GIMAP2Q9UG22 337 aa21.45■■□□□ 1.02
SYNGR3-202ENST00000562045 IGKV1-8A0A0C4DH67 115 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 CAPNS1P04632 268 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 SPTBP11277 2137 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 GRK3P35626 688 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 ERVK-8P63133 956 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 CSNK1G2P78368 415 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 IRX1P78414 480 aaPredicted RBP21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 HSD11B2P80365 405 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 HMGCS1Q01581 520 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 DDX39BQ13838 428 aaKnown RBP21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 SMU1Q2TAY7 513 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 GALNTL6Q49A17 601 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 YTHDF3Q7Z739 585 aaKnown RBP21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 CPSF7Q8N684 471 aaKnown RBP21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 FNDC5Q8NAU1 212 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 HUS1BQ8NHY5 278 aa21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 MTERF1Q99551 399 aaKnown RBP21.44■■□□□ 1.02
SYNGR3-202ENST00000562045 CCDC106Q9BWC9 280 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms