RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ZNF169Q14929 603 aaPredicted RBP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 EIF2S3LQ2VIR3 472 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 C18orf21Q32NC0 220 aaPredicted RBP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 CTAGE6Q86UF2 777 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 OR5T3Q8NGG3 340 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 DNAJB14Q8TBM8 379 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 METTL21AQ8WXB1 218 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 CDKL2Q92772 493 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 SARGQ9BW04 601 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 FAM129AQ9BZQ8 928 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 ZNF700Q9H0M5 742 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 CTNNAL1Q9UBT7 734 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 SLC22A14Q9Y267 594 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 MTO1Q9Y2Z2 717 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 OARD1Q9Y530 152 aa16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 COPG1Q9Y678 874 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-208ENST00000561271 PCDH17O14917 1159 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 SEMA7AO75326 666 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 CDC123O75794 336 aaPredicted RBP16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 WISP3O95389 354 aaPredicted RBP16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 ZNF888P0CJ79 500 aaPredicted RBP16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 RNF224P0DH78 156 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 ITGAMP11215 1152 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 SCTRP47872 440 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 PLTPP55058 493 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 OLR1P78380 273 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 CDKL1Q00532 357 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 RGS1Q08116 209 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 CDC16Q13042 620 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 TRADDQ15628 312 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 DEFB134Q4QY38 66 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 B3GNTL1Q67FW5 361 aaPredicted RBP16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 CCDC25Q86WR0 208 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 SPATA6LQ8N4H0 392 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 TBC1D19Q8N5T2 526 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 ANKRD7Q92527 254 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 PEX11GQ96HA9 241 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 RBBP8Q99708 897 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 PELI2Q9HAT8 420 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 POPDC3Q9HBV1 291 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 TXNDC16Q9P2K2 825 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 UTP11Q9Y3A2 253 aaKnown RBP16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 SLC22A7Q9Y694 548 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 PCNX1Q96RV3 2341 aa16.24■□□□□ 0.19
CDC42BPB-208ENST00000561271 NCF1BA6NI72 391 aaPredicted RBP16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 FAM159BA6NKW6 160 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 NCF1CA8MVU1 366 aaPredicted RBP16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 WDR47O94967 919 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 F10P00742 488 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 C1QAP02745 245 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 NCF1P14598 390 aaPredicted RBP16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 TSFMP43897 325 aaKnown RBP16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 GPX6P59796 221 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 ARG2P78540 354 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 POU4F1Q01851 419 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 PWP1Q13610 501 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 USP10Q14694 798 aaKnown RBP16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 HERC3Q15034 1050 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 TLR1Q15399 786 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 NXPE4Q6UWF7 544 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 ZDHHC24Q6UX98 284 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 RIPOR1Q6ZS17 1223 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 CPEB2Q7Z5Q1 589 aaKnown RBP16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 CTAGE3PQ8IX95 158 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 AFAP1L2Q8N4X5 818 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 ANKRD53Q8N9V6 530 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 CATSPER1Q8NEC5 780 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 PRR7Q8TB68 274 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 NT5CQ8TCD5 201 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 FBXO25Q8TCJ0 367 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 RHBDF1Q96CC6 855 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 TSPAN17Q96FV3 270 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 IMMP1LQ96LU5 166 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 LMF1Q96S06 567 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 GPR22Q99680 433 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 CPNE1Q99829 537 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 AIF1LQ9BQI0 150 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 TUBB6Q9BUF5 446 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 DERL2Q9GZP9 239 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 RAB17Q9H0T7 212 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 PLA2G3Q9NZ20 509 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 ZFP69BQ9UJL9 534 aa16.23■□□□□ 0.19
CDC42BPB-208ENST00000561271 CACNA1DQ01668 2161 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 GALR3O60755 368 aaPredicted RBP16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 DNAJB6O75190 326 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 WFS1O76024 890 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 CBX6O95503 412 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 CYC1P08574 325 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 ALOX12P18054 663 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 AHRP35869 848 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 GMPRP36959 345 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 GP5P40197 560 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 HNF4AP41235 474 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 GDF5P43026 501 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 SLC6A12P48065 614 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 EFTUD2Q15029 972 aaKnown RBP eCLIP16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 ANKRD37Q7Z713 158 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 TSLPQ969D9 159 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 CYTH2Q99418 400 aa16.22■□□□□ 0.19
CDC42BPB-208ENST00000561271 LANCL2Q9NS86 450 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms