RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SPASTQ9UBP0 616 aa16.39■□□□□ 0.21
HDDC3-206ENST00000561036 KLK4Q9Y5K2 254 aa16.39■□□□□ 0.21
HDDC3-206ENST00000561036 AP1M2Q9Y6Q5 423 aa16.39■□□□□ 0.21
HDDC3-206ENST00000561036 TRBV5-3A0A0A0MS03 114 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 VILLO15195 856 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 CAPN5O15484 640 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 NDUFS4O43181 175 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 LCMT2O60294 686 aaKnown RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 KLK1P06870 262 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 C8BP07358 591 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 ANPEPP15144 967 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 DDX5P17844 614 aaKnown RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 TCN1P20061 433 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 HTR1EP28566 365 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 GSK3BP49841 420 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 NXPH1P58417 271 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 RPS15AP62244 130 aaKnown RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 LIPEQ05469 1076 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 PDE7AQ13946 482 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 FXNQ16595 210 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 SLC5A12Q1EHB4 618 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 DUOXA1Q1HG43 343 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 RUNDC3AQ59EK9 446 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 KIAA1614Q5VZ46 1190 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 FAM71E1Q6IPT2 247 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 PAQR7Q86WK9 346 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 DHFR2Q86XF0 187 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 PTRH1Q86Y79 214 aaKnown RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 NAGSQ8N159 534 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 TMEM132CQ8N3T6 1108 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 FBXL6Q8N531 539 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 FAM156AQ8NDB6 213 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 VPS37AQ8NEZ2 397 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 BHLHE22Q8NFJ8 381 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 FLVCR1-AS1Q8TAF5 88 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 ZDHHC1Q8WTX9 485 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 THAP11Q96EK4 314 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 PPM1MQ96MI6 270 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 DUSP26Q9BV47 211 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 REXO4Q9GZR2 422 aaKnown RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 PAIP1Q9H074 479 aaKnown RBP16.38■□□□□ 0.21
HDDC3-206ENST00000561036 ALG2Q9H553 416 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 UCK1Q9HA47 277 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 ATAD3AQ9NVI7 634 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 ACTR3BQ9P1U1 418 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 BTNL2Q9UIR0 455 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 FANCMQ8IYD8 2048 aa16.38■□□□□ 0.21
HDDC3-206ENST00000561036 PRSS51A0A1B0GVH4 220 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 LRIT2A6NDA9 550 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 GABRR3A8MPY1 467 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 C2orf74A8MZ97 194 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 SAP18O00422 153 aaKnown RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 PLPP1O14494 284 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 DFNA5O60443 496 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 CELA2BP08218 269 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 BCKDHBP21953 392 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 MSX2P35548 267 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 BSGP35613 385 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 BCL6P41182 706 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 WNT3P56703 355 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 HNRNPKP61978 463 aaKnown RBP eCLIP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 TRA2BP62995 288 aaKnown RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 CYP4F2P78329 520 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 SIM2Q14190 667 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 HKDC1Q2TB90 917 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 ADPRMQ3LIE5 342 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 AASDHQ4L235 1098 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 RABL3Q5HYI8 236 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 CCNYL2Q5T2Q4 361 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 IRAK1BP1Q5VVH5 260 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 OR4F3Q6IEY1 312 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 LCN8Q6JVE9 175 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 TMEM26Q6ZUK4 368 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 C11orf74Q86VG3 221 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 NUDT13Q86X67 352 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 SRFBP1Q8NEF9 429 aaKnown RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 TNIP2Q8NFZ5 429 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 OR7A2PQ8NGA2 310 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 CDC26Q8NHZ8 85 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 JPH3Q8WXH2 748 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 GFM2Q969S9 779 aaKnown RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 DUS3LQ96G46 650 aaKnown RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 CCDC115Q96NT0 180 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 GBP5Q96PP8 586 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 OR2A14Q96R47 310 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 F2RL3Q96RI0 385 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 KCTD14Q9BQ13 255 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 MIR1-1HGQ9H1L0 117 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 ACTR10Q9NZ32 417 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 VAPAQ9P0L0 249 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-206ENST00000561036 NEUROG3Q9Y4Z2 214 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 PCDHGA4Q9Y5G9 962 aa16.37■□□□□ 0.21
HDDC3-206ENST00000561036 ARHGAP10A1A4S6 786 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 OR2A25A4D2G3 310 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 OR6C74A6NCV1 312 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 AQP12BA6NM10 295 aa16.36■□□□□ 0.21
HDDC3-206ENST00000561036 RFXANKO14593 260 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms