RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ASAH1Q13510 395 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 ANGPTL8Q6UXH0 198 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 PTCHD4Q6ZW05 846 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 DENND6BQ8NEG7 585 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 CCDC120Q96HB5 630 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 HDHD5Q9BXW7 423 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 P2RY12Q9H244 342 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 PDFQ9HBH1 243 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 NDUFAF4Q9P032 175 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 CLCA3PQ9Y6N3 262 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 J3KTA2 159 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 CDRT1O95170 752 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 PRIM2P49643 509 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 GZMKP49863 264 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 TATDN3Q17R31 274 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 CDONQ4KMG0 1287 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 C10orf120Q5SQS8 335 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 SLC35F1Q5T1Q4 408 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 ERICH5Q6P6B1 374 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 C19orf48Q6RUI8 117 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 FAM151BQ6UXP7 276 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 SLC34A3Q8N130 599 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 MGME1Q9BQP7 344 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 PRSS21Q9Y6M0 314 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 CDK2AP1O14519 115 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 CA12O43570 354 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 SH3BGRLO75368 114 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 PRAMEF12O95522 483 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 MYCP01106 439 aaPredicted RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 ALPPP05187 535 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 CTSHP09668 335 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 PRPS2P11908 318 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 GPX2P18283 190 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 GPC1P35052 558 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 RGS4P49798 205 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 SAXO2Q658L1 398 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 GLRX5Q86SX6 157 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 MON1AQ86VX9 555 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 BBS7Q8IWZ6 715 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 THEM5Q8N1Q8 247 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 C9orf43Q8TAL5 461 aaPredicted RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 REPS1Q96D71 796 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 C8orf48Q96LL4 319 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 COPS8Q99627 209 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 NTMT1Q9BV86 223 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 TPT1P8Q9HAU6 139 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 FZD4Q9ULV1 537 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 POFUT2Q9Y2G5 429 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 ANKRD66B4E2M5 251 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 YY2O15391 372 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 PLA2G10O15496 165 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 STK16O75716 305 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 PSKH1P11801 424 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 COX7A2P14406 83 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 CTPS1P17812 591 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 HOXD9P28356 352 aaPredicted RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 PTGES3Q15185 160 aaKnown RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 SYT12Q8IV01 421 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 TMEM203Q969S6 136 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 TESCQ96BS2 214 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 GFM1Q96RP9 751 aaKnown RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 TAPBPLQ9BX59 468 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 MALT1Q9UDY8 824 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 ALG5Q9Y673 324 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 COL4A4P53420 1690 aaPredicted RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 A0A1W2PQL4 384 aaPredicted RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 AP2A2O94973 939 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 CCNB2O95067 398 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 YBEYP58557 167 aaPredicted RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 LARS2Q15031 903 aaKnown RBP15.89■□□□□ 0.13
TPM1-228ENST00000560975 PLAG1Q6DJT9 500 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 PLET1Q6UQ28 207 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 SH3KBP1Q96B97 665 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 CDCA4Q9BXL8 241 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 MIXL1Q9H2W2 232 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 ZNF556Q9HAH1 456 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 ST3GAL5Q9UNP4 418 aa15.89■□□□□ 0.13
TPM1-228ENST00000560975 MYO16Q9Y6X6 1858 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 TNFRSF21O75509 655 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 HLA-EP13747 358 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 POU3F3P20264 500 aaPredicted RBP15.88■□□□□ 0.13
TPM1-228ENST00000560975 CD9P21926 228 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 TARDBPQ13148 414 aaKnown RBP eCLIP15.88■□□□□ 0.13
TPM1-228ENST00000560975 HNRNPA0Q13151 305 aaKnown RBP15.88■□□□□ 0.13
TPM1-228ENST00000560975 ARHGEF6Q15052 776 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 GPR19Q15760 415 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 UGT8Q16880 541 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 CCDC149Q6ZUS6 474 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 PGBD3Q8N328 593 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 MARCH2Q9P0N8 246 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 LEUTXA8MZ59 168 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 FZD9O00144 591 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 PCDH17O14917 1159 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 F2P00734 622 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 PSMA1P25786 263 aaKnown RBP15.88■□□□□ 0.13
TPM1-228ENST00000560975 CDC42P60953 191 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 TWF1Q12792 350 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 NFE2L1Q14494 772 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 GANABQ14697 944 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms