RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 MAPK10P53779 464 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 STXBP1P61764 594 aaKnown RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 RGS1Q08116 209 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 ABHD18Q0P651 414 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 HERC3Q15034 1050 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 ZRSR2Q15696 482 aaKnown RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 NDUFA9Q16795 377 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 UGT3A2Q3SY77 523 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 ARL13AQ5H913 290 aaPredicted RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 CFAP157Q5JU67 520 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 RGS9BPQ6ZS82 235 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 TIPARPQ7Z3E1 657 aaKnown RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 SYVN1Q86TM6 617 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 TRIM42Q8IWZ5 723 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.53□□□□□ -0.56
IRF9-211ENST00000560852 ESX1Q8N693 406 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 GBP7Q8N8V2 638 aaPredicted RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 TTC29Q8NA56 475 aaPredicted RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 HUS1BQ8NHY5 278 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 N4BP2L2Q92802 583 aaPredicted RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 ATP6V1E2Q96A05 226 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 MS4A6EQ96DS6 147 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 C11orf24Q96F05 449 aaPredicted RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 CMTM7Q96FZ5 175 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 C10orf90Q96M02 699 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 CCT7Q99832 543 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 NDC1Q9BTX1 674 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 MECRQ9BV79 373 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 MS4A8Q9BY19 250 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 DPH1Q9BZG8 443 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 ACTR5Q9H9F9 607 aaPredicted RBP11.53□□□□□ -0.56
IRF9-211ENST00000560852 CUTCQ9NTM9 273 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 ABCF3Q9NUQ8 709 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 PADI1Q9ULC6 663 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 SNX6Q9UNH7 406 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 PCDHGA6Q9Y5G7 932 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 PCM1Q15154 2024 aa11.53□□□□□ -0.56
IRF9-211ENST00000560852 ADAMTS20P59510 1910 aa11.52□□□□□ -0.56
IRF9-211ENST00000560852 SEMA3DO95025 777 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 MED26O95402 600 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 KRT6AP02538 564 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 KRT6BP04259 564 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CAPN1P07384 714 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CYC1P08574 325 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 RAB40ALP0C0E4 278 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 UROSP10746 265 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 LIPCP11150 499 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 PIM1P11309 404 aaPredicted RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 ZNF28P17035 718 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 IL10P22301 178 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 PRPH2P23942 346 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 ARRB2P32121 409 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 KRT6CP48668 564 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 MEF2AQ02078 507 aaPredicted RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 GPS2Q13227 327 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 RBBP5Q15291 538 aaKnown RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 CPSF6Q16630 551 aaKnown RBP eCLIP11.52□□□□□ -0.57
IRF9-211ENST00000560852 HKDC1Q2TB90 917 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 DEFB110Q30KQ9 67 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 HHATQ5VTY9 493 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CES4AQ5XG92 561 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 C6orf15Q6UXA7 325 aaPredicted RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 ATG14Q6ZNE5 492 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CHSY3Q70JA7 882 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 TMEM126BQ8IUX1 230 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CLYBLQ8N0X4 340 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 OR2L5Q8NG80 312 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 UTP15Q8TED0 518 aaKnown RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 NKD1Q969G9 470 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 GAL3ST3Q96A11 431 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 FKBP10Q96AY3 582 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 NACC2Q96BF6 587 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 MOCOSQ96EN8 888 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 QRFPRQ96P65 431 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CTRCQ99895 268 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 TBCDQ9BTW9 1192 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 NPLQ9BXD5 320 aaPredicted RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 ULBP3Q9BZM4 244 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 TGIF2Q9GZN2 237 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 ROGDIQ9GZN7 287 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 AICDAQ9GZX7 198 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 CCDC86Q9H6F5 360 aaKnown RBP11.52□□□□□ -0.57
IRF9-211ENST00000560852 DMRT3Q9NQL9 472 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 AK5Q9Y6K8 562 aa11.52□□□□□ -0.57
IRF9-211ENST00000560852 VSTM2BA6NLU5 285 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 C21orf140B9A014 251 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 NDUFS4O43181 175 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 GALR3O60755 368 aaPredicted RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 ULK1O75385 1050 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 KIAA0754O94854 1291 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 OR4F21O95013 312 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 KLK3P07288 261 aaPredicted RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 ALOX12P18054 663 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 ITGAXP20702 1163 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 ABCE1P61221 599 aaKnown RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 SKP1P63208 163 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 DCDP81605 110 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms