RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NCF2P19878 526 aaPredicted RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 PTX3P26022 381 aaPredicted RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 GSTM2P28161 218 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 LIMK1P53667 647 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 RPL38P63173 70 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 E2F1Q01094 437 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 RELAQ04206 551 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 COL9A2Q14055 689 aaPredicted RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 GPR19Q15760 415 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 AP5B1Q2VPB7 878 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 KHDRBS2Q5VWX1 349 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 RBM44Q6ZP01 1051 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 CHSY3Q70JA7 882 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 DGLUCYQ7Z3D6 616 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 KMT5CQ86Y97 462 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 ZNF655Q8N720 491 aaPredicted RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 CSNK1A1LQ8N752 337 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 FNDC5Q8NAU1 212 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 CEP70Q8NHQ1 597 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 WDR48Q8TAF3 677 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 ZCCHC10Q8TBK6 192 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 CREB3L4Q8TEY5 395 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 KLHL6Q8WZ60 621 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 APIPQ96GX9 242 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 MAELQ96JY0 434 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 CATSPER2Q96P56 530 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 F2RL3Q96RI0 385 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 CENPKQ9BS16 269 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 C1orf50Q9BV19 199 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 MRPL1Q9BYD6 325 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 NLNQ9BYT8 704 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 KLHL31Q9H511 634 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 ZNF768Q9H5H4 540 aaKnown RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 LRTM1Q9HBL6 345 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 STARD5Q9NSY2 213 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 NMRK1Q9NWW6 199 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 C1orf109Q9NX04 203 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 SEMA5BQ9P283 1151 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 HEY2Q9UBP5 337 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 PLCL2Q9UPR0 1127 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 CCL27Q9Y4X3 112 aa9.96□□□□□ -0.82
TPM1-221ENST00000559831 POLR3HQ9Y535 204 aaPredicted RBP9.96□□□□□ -0.82
TPM1-221ENST00000559831 SCN2AQ99250 2005 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 A0A0G2JN53 185 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 LRIT2A6NDA9 550 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 TMEM150CB9EJG8 249 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 TOX3O15405 576 aaPredicted RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 TBX6O95947 436 aaPredicted RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 CTSBP07858 339 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 SERPINA6P08185 405 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 ANKRD34CP0C6C1 535 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 NELFEP18615 380 aaKnown RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 HNRNPH1P31943 449 aaKnown RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 STXBP1P61764 594 aaKnown RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 ACSM2AQ08AH3 577 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 ILKQ13418 452 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 TUBB3Q13509 450 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 PWP1Q13610 501 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 HKDC1Q2TB90 917 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 C6orf136Q5SQH8 315 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 WASHC2DQ5SRD0 308 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 DEPDC1Q5TB30 811 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 TMEM198Q66K66 360 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 ACSM2BQ68CK6 577 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 LARP4Q71RC2 724 aaKnown RBP eCLIP9.95□□□□□ -0.82
TPM1-221ENST00000559831 ARHGAP22Q7Z5H3 698 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 B3GNT8Q7Z7M8 397 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 ZFAND4Q86XD8 727 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 SLITRK4Q8IW52 837 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 D2HGDHQ8N465 521 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 C1orf52Q8N6N3 182 aaKnown RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 ANKS4BQ8N8V4 417 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 CAMKVQ8NCB2 501 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 NT5CQ8TCD5 201 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 NETO1Q8TDF5 533 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 SLC41A2Q96JW4 573 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 SORBS1Q9BX66 1292 aaKnown RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 EBPLQ9BY08 206 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 REXO4Q9GZR2 422 aaKnown RBP9.95□□□□□ -0.82
TPM1-221ENST00000559831 FANCEQ9HB96 536 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 PDP2Q9P2J9 529 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 TRIM33Q9UPN9 1127 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 FAM186AA6NE01 2351 aa9.95□□□□□ -0.82
TPM1-221ENST00000559831 CROCCQ5TZA2 2017 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 SPAARA0A1B0GVQ0 90 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 RTCAO00442 366 aaKnown RBP9.94□□□□□ -0.82
TPM1-221ENST00000559831 UBDO15205 165 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 ERI3O43414 337 aaKnown RBP9.94□□□□□ -0.82
TPM1-221ENST00000559831 MYO1DO94832 1006 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 ALDOCP09972 364 aaKnown RBP9.94□□□□□ -0.82
TPM1-221ENST00000559831 PRR35P0CG20 571 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 ZNF888P0CJ79 500 aaPredicted RBP9.94□□□□□ -0.82
TPM1-221ENST00000559831 FOLR1P15328 257 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 PRPH2P23942 346 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 CSTF2P33240 577 aaKnown RBP eCLIP9.94□□□□□ -0.82
TPM1-221ENST00000559831 GABRA4P48169 554 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 PLA2G16P53816 162 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 CLDN6P56747 220 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 RAB8AP61006 207 aa9.94□□□□□ -0.82
TPM1-221ENST00000559831 ERVK-8P63133 956 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms