RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 USP10Q14694 798 aaKnown RBP12.32□□□□□ -0.44
TPM1-220ENST00000559556 SFT2D3Q587I9 215 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 CAPN13Q6MZZ7 669 aaPredicted RBP12.32□□□□□ -0.44
TPM1-220ENST00000559556 TTC27Q6P3X3 843 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 MBOAT1Q6ZNC8 495 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 ASPGQ86U10 573 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 SLC26A11Q86WA9 606 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 GAS2L3Q86XJ1 694 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 SIAH3Q8IW03 269 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 AGGF1Q8N302 714 aaeCLIP12.32□□□□□ -0.44
TPM1-220ENST00000559556 SLC5A8Q8N695 610 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 PLPP5Q8NEB5 264 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 TRIM58Q8NG06 486 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 ADAMTS18Q8TE60 1221 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 LPAR4Q99677 370 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 SARGQ9BW04 601 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 KLHL1Q9NR64 748 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 ADAMTS6Q9UKP5 1117 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 FBXO5Q9UKT4 447 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 PDE10AQ9Y233 779 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 NAALAD2Q9Y3Q0 740 aa12.32□□□□□ -0.44
TPM1-220ENST00000559556 GABRR3A8MPY1 467 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 FAM227AF5H4B4 570 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 LCMT2O60294 686 aaKnown RBP12.31□□□□□ -0.44
TPM1-220ENST00000559556 CEP104O60308 925 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 MAN1A2O60476 641 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 NEURL1O76050 574 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 HAUS5O94927 633 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 KRT14P02533 472 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 C8GP07360 202 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 SNRPB2P08579 225 aaKnown RBP12.31□□□□□ -0.44
TPM1-220ENST00000559556 ESRRAP11474 423 aaPredicted RBP12.31□□□□□ -0.44
TPM1-220ENST00000559556 CDH1P12830 882 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 CD46P15529 392 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 CXCR5P32302 372 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 GRK3P35626 688 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 SMSP52788 366 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 MPP1Q00013 466 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 TIAL1Q01085 375 aaKnown RBP eCLIP12.31□□□□□ -0.44
TPM1-220ENST00000559556 ALDH6A1Q02252 535 aaKnown RBP12.31□□□□□ -0.44
TPM1-220ENST00000559556 HERC3Q15034 1050 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 NSDHLQ15738 373 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 AGTRAPQ6RW13 159 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 LCTLQ6UWM7 567 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 SPPL2CQ8IUH8 684 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 ZNF295-AS1Q8N0V1 137 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 AFAP1L2Q8N4X5 818 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 HORMAD2Q8N7B1 307 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 MFSD9Q8NBP5 474 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 EEF1AKMT1Q8WVE0 214 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 SLC13A3Q8WWT9 602 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 TSLPQ969D9 159 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 PEX11GQ96HA9 241 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 SIGLEC10Q96LC7 697 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 TRIM51Q9BSJ1 452 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 FAM167BQ9BTA0 163 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 RBCK1Q9BYM8 510 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 TSPAN10Q9H1Z9 355 aaPredicted RBP12.31□□□□□ -0.44
TPM1-220ENST00000559556 PARVBQ9HBI1 364 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 LZTFL1Q9NQ48 299 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 C20orf96Q9NUD7 363 aaPredicted RBP12.31□□□□□ -0.44
TPM1-220ENST00000559556 ANKRD10Q9NXR5 420 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 TRMT6Q9UJA5 497 aaKnown RBP12.31□□□□□ -0.44
TPM1-220ENST00000559556 MEMO1Q9Y316 297 aa12.31□□□□□ -0.44
TPM1-220ENST00000559556 ZNF860A6NHJ4 632 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 GOLGA8MH3BSY2 632 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 CDC123O75794 336 aaPredicted RBP12.3□□□□□ -0.44
TPM1-220ENST00000559556 CLDN14O95500 239 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 FHP07954 510 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 RGS4P49798 205 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 ST13P50502 369 aaKnown RBP12.3□□□□□ -0.44
TPM1-220ENST00000559556 RIPPLY3P57055 190 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 SLC26A5P58743 744 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 TAS2R50P59544 299 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 DHX9Q08211 1270 aaKnown RBP12.3□□□□□ -0.44
TPM1-220ENST00000559556 NAE1Q13564 534 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 CDSNQ15517 529 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 HSP90AA5PQ58FG0 334 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 SPINK14Q6IE38 97 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 UGT3A1Q6NUS8 523 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 GALNTL5Q7Z4T8 443 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 CHERPQ8IWX8 916 aaKnown RBP12.3□□□□□ -0.44
TPM1-220ENST00000559556 FAM98AQ8NCA5 519 aaKnown RBP12.3□□□□□ -0.44
TPM1-220ENST00000559556 ZNF740Q8NDX6 193 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 ABHD11Q8NFV4 315 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 OR4K1Q8NGD4 311 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 OR5T3Q8NGG3 340 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 ELP5Q8TE02 316 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 PHF10Q8WUB8 498 aaKnown RBP12.3□□□□□ -0.44
TPM1-220ENST00000559556 MTFMTQ96DP5 389 aaKnown RBP12.3□□□□□ -0.44
TPM1-220ENST00000559556 HAUS8Q9BT25 410 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 ATG10Q9H0Y0 220 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 GPAMQ9HCL2 828 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 TAS2R13Q9NYV9 303 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 NEU2Q9Y3R4 380 aa12.3□□□□□ -0.44
TPM1-220ENST00000559556 NPIPA5E9PKD4 350 aa12.29□□□□□ -0.44
TPM1-220ENST00000559556 C19orf84I3L1E1 186 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms