RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 CAMLGP49069 296 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 NR0B1P51843 470 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 LUMP51884 338 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 DLX5P56178 289 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 OR1D5P58170 312 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 STARD6P59095 220 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SRP54P61011 504 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 POLR2FP61218 127 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 ARF5P84085 180 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 CDR2Q01850 454 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SP3Q02447 781 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ARHGAP1Q07960 439 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 WASHC5Q12768 1159 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 CDH18Q13634 790 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 PDE7AQ13946 482 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 TRIM29Q14134 588 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 OPCMLQ14982 345 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 RBBP5Q15291 538 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 FUT11Q495W5 492 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 EPC2Q52LR7 807 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 DNAJC21Q5F1R6 531 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 XKR6Q5GH73 641 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 AGAP6Q5VW22 663 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 PRAMEF7Q5VXH5 474 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ETFRF1Q6IPR1 90 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 C19orf48Q6RUI8 117 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 DHRS11Q6UWP2 260 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 C17orf107Q6ZR85 190 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SH2D5Q6ZV89 423 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SLC24A5Q71RS6 500 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SLC26A9Q7LBE3 791 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 COX8CQ7Z4L0 72 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 GPR141Q7Z602 305 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 PHLDB2Q86SQ0 1253 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ADAMTSL2Q86TH1 951 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 PRUNE1Q86TP1 453 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 CCDC60Q8IWA6 550 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 STHQ8IWL8 128 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 LAX1Q8IWV1 398 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 RCOR2Q8IZ40 523 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 THEM5Q8N1Q8 247 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 METTL27Q8N6F8 245 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 GBP7Q8N8V2 638 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 OR7A2PQ8NGA2 310 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 CD99L2Q8TCZ2 262 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 GPR148Q8TDV2 347 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SLC26A7Q8TE54 656 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 HPSE2Q8WWQ2 592 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SLC13A3Q8WWT9 602 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 METTL21AQ8WXB1 218 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 TM9SF4Q92544 642 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 GGHQ92820 318 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ZNF524Q96C55 264 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 NXPE2Q96DL1 559 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 TBC1D31Q96DN5 1066 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 LGALS12Q96DT0 336 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 WBP1Q96G27 269 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ZNF486Q96H40 463 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 NECTIN4Q96NY8 510 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 DUX5Q96PT3 197 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 BTBD9Q96Q07 612 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 RUFY1Q96T51 708 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 C17orf62Q9BQA9 187 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ZNF577Q9BSK1 485 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SPXQ9BT56 116 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 FSD1Q9BTV5 496 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 IDI2Q9BXS1 227 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 UBQLN3Q9H347 655 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 CPVLQ9H3G5 476 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 DPEP2Q9H4A9 486 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 DPEP3Q9H4B8 488 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ATP13A3Q9H7F0 1226 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 C10orf88Q9H8K7 445 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 KCNMB3Q9NPA1 279 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 CHST11Q9NPF2 352 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 SLC52A3Q9NQ40 469 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 PRMT8Q9NR22 394 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 GPR173Q9NS66 373 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 FAM212BQ9NTI7 297 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 ECHDC1Q9NTX5 307 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ZCCHC3Q9NUD5 404 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 PDRG1Q9NUG6 133 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 EPHA6Q9UF33 1036 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 IL19Q9UHD0 177 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 PILRBQ9UKJ0 227 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 POMT2Q9UKY4 750 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 KCNJ14Q9UNX9 436 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 AGTPBP1Q9UPW5 1226 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 NUDCQ9Y266 331 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 ZNF510Q9Y2H8 683 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 RPH3AQ9Y2J0 694 aaPredicted RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 TDRKHQ9Y2W6 561 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 ANGPTL3Q9Y5C1 460 aa1.46□□□□□ -2.18
USP3-209ENST00000558925 DHX29Q7Z478 1369 aaKnown RBP1.46□□□□□ -2.18
USP3-209ENST00000558925 STK36Q9NRP7 1315 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 MYH15Q9Y2K3 1946 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 A0A087WUV0 522 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 A0A0U1RRA0 63 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TMEM129A0AVI4 362 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 SLC15A5A6NIM6 579 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms