RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 DCUN1D3Q8IWE4 304 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 CNTN4Q8IWV2 1026 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 CCDC185Q8N715 623 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 CHURC1Q8WUH1 139 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 CDHR1Q96JP9 859 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 ZNF559Q9BR84 538 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 NYXQ9GZU5 481 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 SHARPINQ9H0F6 387 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 ABCG8Q9H221 673 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 TNMDQ9H2S6 317 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 DPEP2Q9H4A9 486 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 VIPAS39Q9H9C1 493 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 MRPL17Q9NRX2 175 aaKnown RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 PANK4Q9NVE7 773 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 DNAJC11Q9NVH1 559 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 ANO10Q9NW15 660 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 ICAM5Q9UMF0 924 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 FOXA2Q9Y261 457 aaPredicted RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 TDRKHQ9Y2W6 561 aaKnown RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 A0A087WUV0 522 aaPredicted RBP3.93□□□□□ -1.78
CASC4-206ENST00000558847 TMEM129A0AVI4 362 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 SYCE3A1L190 88 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ANKDD1BA6NHY2 528 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 SLC9B1P1A6NJY1 282 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 LMX1BO60663 402 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 HSF2BPO75031 334 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 AP2A2O94973 939 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 GPIP06744 558 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 GSTA2P09210 222 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 HMOX1P09601 288 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ERVK-10P10266 1014 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 DLATP10515 647 aaKnown RBP3.93□□□□□ -1.78
CASC4-206ENST00000558847 ZNF18P17022 549 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 MAGEB1P43366 347 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 NR0B1P51843 470 aaKnown RBP3.93□□□□□ -1.78
CASC4-206ENST00000558847 DCDC1P59894 354 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 GRB14Q14449 540 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ZNF74Q16587 644 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ZNF542PQ5EBM4 170 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 SLC25A53Q5H9E4 307 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 STPG1Q5TH74 334 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 RAB12Q6IQ22 244 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 PSRC1Q6PGN9 363 aaPredicted RBP3.93□□□□□ -1.78
CASC4-206ENST00000558847 TMEM207Q6UWW9 146 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 COX8CQ7Z4L0 72 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 RABEPKQ7Z6M1 372 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 SMIM29Q86T20 159 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ZNF410Q86VK4 478 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 LRTM2Q8N967 370 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 OR5AP2Q8NGF4 316 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 OR5T2Q8NGG2 359 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 OR4D10Q8NGI6 311 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 OR10G8Q8NGN5 311 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 OR4C3Q8NH37 302 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 OR1L3Q8NH93 324 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 LRRC8CQ8TDW0 803 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 GGHQ92820 318 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 LGALS12Q96DT0 336 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 C10orf90Q96M02 699 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 INPP4AQ96PE3 977 aaPredicted RBP3.93□□□□□ -1.78
CASC4-206ENST00000558847 RUFY1Q96T51 708 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 TDRD1Q9BXT4 1180 aaKnown RBP3.93□□□□□ -1.78
CASC4-206ENST00000558847 THAP2Q9H0W7 228 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 TMEM245Q9H330 911 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ZDHHC6Q9H6R6 413 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 TMOD3Q9NYL9 352 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 TEKT2Q9UIF3 430 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 HOOK1Q9UJC3 728 aaKnown RBP3.93□□□□□ -1.78
CASC4-206ENST00000558847 PILRBQ9UKJ0 227 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 TSPAN16Q9UKR8 245 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ERVK-19Q9WJR5 959 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 KCNK6Q9Y257 313 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 NCKAP1Q9Y2A7 1128 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 EXOC6BQ9Y2D4 811 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 ZNF510Q9Y2H8 683 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 STK36Q9NRP7 1315 aa3.93□□□□□ -1.78
CASC4-206ENST00000558847 IGHV4-4A0A075B6R2 117 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 A0A0A6YYC8 382 aaPredicted RBP3.92□□□□□ -1.78
CASC4-206ENST00000558847 RNF103-CHMP3A0A140T963 221 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 GTPBP10A4D1E9 387 aaKnown RBP3.92□□□□□ -1.78
CASC4-206ENST00000558847 ANTXRLA6NF34 631 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 PMS2P5A8MQ11 134 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 A8MVM7 634 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 I3L1I5 382 aaPredicted RBP3.92□□□□□ -1.78
CASC4-206ENST00000558847 RNF103O00237 685 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 SLC1A7O00341 560 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 CYTIPO60759 359 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 CDC123O75794 336 aaPredicted RBP3.92□□□□□ -1.78
CASC4-206ENST00000558847 MMP10P09238 476 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 RPL35AP18077 110 aaKnown RBP3.92□□□□□ -1.78
CASC4-206ENST00000558847 CDKN1AP38936 164 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 SLC1A3P43003 542 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 CLCN4P51793 760 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 CASP9P55211 416 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 UCP2P55851 309 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 ITGA9Q13797 1035 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 TCEAL6Q6IPX3 200 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 B3GLCTQ6Y288 498 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 LEKR1Q6ZMV7 388 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 THEM5Q8N1Q8 247 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms