RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 C10orf107Q8IVU9 208 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 UNC45BQ8IWX7 931 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 SLC38A6Q8IZM9 456 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 CLYBLQ8N0X4 340 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 OR4N4Q8N0Y3 316 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 SCML4Q8N228 414 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 SFRP1Q8N474 314 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 ARFGAP1Q8N6T3 406 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 ZNF781Q8N8C0 355 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 ASCC1Q8N9N2 400 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 BEST2Q8NFU1 509 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 OR2T34Q8NGX1 318 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 OR6F1Q8NGZ6 308 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 OR2T3Q8NH03 318 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 RHOXF1Q8NHV9 184 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 GRPEL2Q8TAA5 225 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 HMGCLL1Q8TB92 370 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 DYNC2LI1Q8TCX1 351 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 PIGBQ92521 554 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 PIGKQ92643 395 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 HDAC2Q92769 488 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 PEX13Q92968 403 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 TRIM63Q969Q1 353 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 ROPN1LQ96C74 230 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 DCPSQ96C86 337 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 FAF2Q96CS3 445 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 RCN3Q96D15 328 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 HDAC11Q96DB2 347 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 NRBF2Q96F24 287 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 TRMT61AQ96FX7 289 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 CENPNQ96H22 339 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 SLC39A13Q96H72 371 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 RNF170Q96K19 258 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 GLT1D1Q96MS3 346 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 AGAP4Q96P64 663 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 FCRL4Q96PJ5 515 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 ZNF300Q96RE9 604 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 TWNKQ96RR1 684 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 CIB1Q99828 191 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 EBNA1BP2Q99848 306 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 C11orf70Q9BRQ4 267 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 SCNM1Q9BWG6 230 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 MTMR12Q9C0I1 747 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 SLIRPQ9GZT3 109 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 NXF2Q9GZY0 626 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 VPS33BQ9H267 617 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 SPAG4Q9NPE6 437 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 CCDC177Q9NQR7 707 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 EIF2B3Q9NR50 452 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 SMPD3Q9NY59 655 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 IFT80Q9P2H3 777 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 TBC1D14Q9P2M4 693 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 WRAP73Q9P2S5 460 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 PI4KBQ9UBF8 816 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 MTRRQ9UBK8 725 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 ANAPC2Q9UJX6 822 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 FBXO5Q9UKT4 447 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 WBP11Q9Y2W2 641 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 UBE2J1Q9Y385 318 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 PCDHB7Q9Y5E2 793 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 COPG1Q9Y678 874 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 AUP1Q9Y679 476 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 MAU2Q9Y6X3 613 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 COL14A1Q05707 1796 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 COL2A1P02458 1487 aaPredicted RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 PARP14Q460N5 1801 aa3.14□□□□□ -1.91
HERC1-203ENST00000558532 XIRP1Q702N8 1843 aaKnown RBP3.14□□□□□ -1.91
HERC1-203ENST00000558532 DICER1Q9UPY3 1922 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 MAGEB16A2A368 324 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 BBIP1A8MTZ0 92 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 KPNA7A9QM74 516 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 F8VP50 259 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TRIM77I1YAP6 450 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 M0QYT0 321 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PSMD11O00231 422 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SDHDO14521 159 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 AIM2O14862 343 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PIP5K1BO14986 540 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ASNA1O43681 348 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CST8O60676 142 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 GMNNO75496 209 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RPP40O75818 363 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 KAT7O95251 611 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 GOT2P00505 430 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 PIGRP01833 764 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RFPL3SP0C7P2 107 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 UMPSP11172 480 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 KRT3P12035 628 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 CDH1P12830 882 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 ENO3P13929 434 aaPredicted RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 CKMT2P17540 419 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 NELFEP18615 380 aaKnown RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 NCF2P19878 526 aaPredicted RBP3.13□□□□□ -1.91
HERC1-203ENST00000558532 ATP6V1B2P21281 511 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 TGM2P21980 687 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 PRKACBP22694 351 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 FASP25445 335 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 SERPINB1P30740 379 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 RRM2P31350 389 aa3.13□□□□□ -1.91
HERC1-203ENST00000558532 HSPA1LP34931 641 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms