RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 MFSD4BQ5TF39 518 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 NCEH1Q6PIU2 408 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 IQCHQ86VS3 1027 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 BBS7Q8IWZ6 715 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 DCP1BQ8IZD4 617 aaKnown RBP5.54□□□□□ -1.52
RTF1-204ENST00000558117 NFKBIDQ8NI38 313 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 FIZ1Q96SL8 496 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 FOXC2Q99958 501 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 MMTAG2Q9BU76 263 aaKnown RBP5.54□□□□□ -1.52
RTF1-204ENST00000558117 STRADBQ9C0K7 418 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 TKTL2Q9H0I9 626 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 MCCC2Q9HCC0 563 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 MAGEE1Q9HCI5 957 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 CHST11Q9NPF2 352 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 ACAD8Q9UKU7 415 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 A4GNTQ9UNA3 340 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 ANAPC1Q9H1A4 1944 aa5.54□□□□□ -1.52
RTF1-204ENST00000558117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.53□□□□□ -1.522e-6■■■■□ 24
RTF1-204ENST00000558117 SMCO2A6NFE2 343 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 PRR23D1E9PI22 279 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 IFIT3O14879 490 aaKnown RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 DKC1O60832 514 aaKnown RBP eCLIP5.53□□□□□ -1.52
RTF1-204ENST00000558117 NEBLO76041 1014 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 MTA2O94776 668 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 TMEM63AO94886 807 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 RTN3O95197 1032 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 CH25HO95992 272 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 MT-CYBP00156 380 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 PRR23D2P0DMB1 279 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 YWHABP31946 246 aaKnown RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 ABCD1P33897 745 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 UGT1A3P35503 534 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 NAPAP54920 295 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 CDH8P55286 799 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 OVGP1Q12889 678 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 SLC39A14Q15043 492 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 HIST2H2ACQ16777 129 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 ZNF630Q2M218 657 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 XKR9Q5GH70 373 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 CFAP58Q5T655 872 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 SNX32Q86XE0 403 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 ARMC8Q8IUR7 673 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 SLC35F3Q8IY50 421 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 PGBD5Q8N414 524 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 CTCFLQ8NI51 663 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 WBP2Q969T9 261 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 FBXL8Q96CD0 374 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 LRFN5Q96NI6 719 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 ZNF570Q96NI8 536 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 XPO6Q96QU8 1125 aaKnown RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 NR1H4Q96RI1 486 aaPredicted RBP5.53□□□□□ -1.52
RTF1-204ENST00000558117 IL25Q9H293 177 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 TBC1D29Q9UFV1 150 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 SVEP1Q4LDE5 3571 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 HIVEP2P31629 2446 aa5.53□□□□□ -1.52
RTF1-204ENST00000558117 PLSCR5A0PG75 271 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 ZNF840PA6NDX5 716 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 LRRIQ4A6NIV6 560 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 D6RAR5 112 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 NEDD8-MDP1E9PL57 170 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 KCNN4O15554 427 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 LATO43561 262 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 MAGEC1O60732 1142 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 NDUFB4O95168 129 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 OAS1P00973 400 aaKnown RBP5.52□□□□□ -1.53
RTF1-204ENST00000558117 ALOX12P18054 663 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 CYP2F1P24903 491 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 HTR1EP28566 365 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 HOXD13P35453 343 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 GNAQP50148 359 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 IST1P53990 364 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 GAS1P54826 345 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 OSTNP61366 133 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 TLE4Q04727 773 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 EFNB3Q15768 340 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 MMEL1Q495T6 779 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 FAM69BQ5VUD6 431 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 SLC46A3Q7Z3Q1 461 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 C4orf19Q8IY42 314 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 OR2T34Q8NGX1 318 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 LMO3Q8TAP4 145 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 SNRNP40Q96DI7 357 aaKnown RBP5.52□□□□□ -1.53
RTF1-204ENST00000558117 SENP8Q96LD8 212 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 TIGD1Q96MW7 591 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 CCDC3Q9BQI4 270 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 CCDC94Q9BW85 323 aaPredicted RBP5.52□□□□□ -1.53
RTF1-204ENST00000558117 POLR3FQ9H1D9 316 aaPredicted RBP5.52□□□□□ -1.53
RTF1-204ENST00000558117 MRGBPQ9NV56 204 aa5.52□□□□□ -1.53
RTF1-204ENST00000558117 PTPRJQ12913 1337 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 TTC41PQ6P2S7 1318 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 SONP18583 2426 aaKnown RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 A0A0U1RQJ8 604 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 hDV102S1A0JD36 115 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 NEMP2A6NFY4 417 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 HIP1O00291 1037 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 WNT9BO14905 357 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 TGFB1I1O43294 461 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 SEC14L5O43304 696 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 ZIC3O60481 467 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 ZBTB11O95625 1053 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms