RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 TDGF1P3P51864 188 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 TIAL1Q01085 375 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 ART3Q13508 389 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 PHKG1Q16816 387 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 BBS9Q3SYG4 887 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 KRTCAP3Q53RY4 240 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 ZNF766Q5HY98 468 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 SP5Q6BEB4 398 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 MBOAT1Q6ZNC8 495 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 LANCL3Q6ZV70 420 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 SYDE1Q6ZW31 735 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 ABHD13Q7L211 337 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 PRSS41Q7RTY9 318 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 STRA8Q7Z7C7 330 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 SLC35F6Q8N357 371 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 OR56A3Q8NH54 315 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 SLCO2A1Q92959 643 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 LRRC39Q96DD0 335 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 PDLIM5Q96HC4 596 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 RUNDC3BQ96NL0 473 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 SARGQ9BW04 601 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 MMP25Q9NPA2 562 aa12.83□□□□□ -0.36
SNRPA1-204ENST00000558020 CCL21O00585 134 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 ALOX12P18054 663 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 EEF1DP29692 281 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 AHRP35869 848 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 OR4D2P58180 307 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 ILF2Q12905 390 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 MORF4L2Q15014 288 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 SFT2D3Q587I9 215 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 RBM20Q5T481 1227 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 TEDDM1Q5T9Z0 273 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 HECTD2Q5U5R9 776 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 FAM45BPQ6NSW5 357 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 PAPD4Q6PIY7 484 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 PDSS2Q86YH6 399 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 BEST3Q8N1M1 668 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 TMEM178AQ8NBL3 297 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 FAM98AQ8NCA5 519 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 TRPV3Q8NET8 790 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 FAM45AQ8TCE6 357 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 ANKRD7Q92527 254 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 PYCR2Q96C36 320 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 FBXL8Q96CD0 374 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 PEX11GQ96HA9 241 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 DDX47Q9H0S4 455 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 ZFP69BQ9UJL9 534 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 DYRK1BQ9Y463 629 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 KCNE2Q9Y6J6 123 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 SCN2AQ99250 2005 aa12.82□□□□□ -0.36
SNRPA1-204ENST00000558020 SCN3AQ9NY46 2000 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 LRBAP50851 2863 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 OR2W5A6NFC9 320 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 PRSS44E7EML9 344 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 PSMD12O00232 456 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 PRMT3O60678 531 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 GALR3O60755 368 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 CDC123O75794 336 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 GUCA1CO95843 209 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 FHP07954 510 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 CD96P40200 585 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 EFNA3P52797 238 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 RHAGQ02094 409 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 OC90Q02509 493 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 TUBA3CQ13748 450 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 DEFB134Q4QY38 66 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 TUBA3EQ6PEY2 450 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 RPTNQ6XPR3 784 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 TICAM1Q8IUC6 712 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 CRLF3Q8IUI8 442 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 LGI4Q8N135 537 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 AFAP1L2Q8N4X5 818 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 NKAPQ8N5F7 415 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 ZNF740Q8NDX6 193 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 ARMC2Q8NEN0 867 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 SLC5A11Q8WWX8 675 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 MOCOSQ96EN8 888 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 CFAP36Q96G28 342 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 AIF1LQ9BQI0 150 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 CHST11Q9NPF2 352 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 ZFATQ9P243 1243 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 SH2B3Q9UQQ2 575 aa12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 KLF2Q9Y5W3 355 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-204ENST00000558020 CPAMD8Q8IZJ3 1885 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 ARHGAP10A1A4S6 786 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 ZNF860A6NHJ4 632 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 NDC80O14777 642 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 CHST10O43529 356 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 H2AFYO75367 372 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 TSPAN12O95859 305 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 ESRRAP11474 423 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 MST1P26927 711 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 ELK3P41970 407 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 CA7P43166 264 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 HNMTP50135 292 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 ARL4CP56559 192 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 ALDH6A1Q02252 535 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 USP10Q14694 798 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms