RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 USP30Q70CQ3 517 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 ZFRQ96KR1 1074 aaKnown RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 ACAD8Q9UKU7 415 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 FADS3Q9Y5Q0 445 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 GSRP00390 522 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 P04436 131 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 AOC1P19801 751 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 HNRNPA2B1P22626 353 aaKnown RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 P2RY2P41231 377 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 STC1P52823 247 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 SLAMF1Q13291 335 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 SLC36A4Q6YBV0 504 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 TRAM1L1Q8N609 369 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 ZSCAN4Q8NAM6 433 aaPredicted RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 CMASQ8NFW8 434 aaPredicted RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 KBTBD8Q8NFY9 601 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 KCND1Q9NSA2 647 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 PRPF19Q9UMS4 504 aaKnown RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 RPH3AQ9Y2J0 694 aaPredicted RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 RTCAO00442 366 aaKnown RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 BTBD16Q32M84 506 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 YIPF7Q8N8F6 280 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 POC5Q8NA72 575 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 C1orf216Q8TAB5 229 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 MALT1Q9UDY8 824 aa13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
SEMA6D-208ENST00000558014 A0A1W2PQ72 361 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 CCDC182A6NF36 153 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 DCNP07585 359 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ITGA5P08648 1049 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 MTTPP55157 894 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ERVFC1P60507 584 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 NR0B2Q15466 257 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 FBXO43Q4G163 708 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 SLC35F1Q5T1Q4 408 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 SLC9A4Q6AI14 798 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 RNF130Q86XS8 419 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 CILP2Q8IUL8 1156 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 GLIS1Q8NBF1 620 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 IL4I1Q96RQ9 567 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 RBM4BQ9BQ04 359 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 EBF4Q9BQW3 602 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 RBM4Q9BWF3 364 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 CCNB1IP1Q9NPC3 277 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 PARPBPQ9NWS1 579 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 GRHPRQ9UBQ7 328 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 J3QRK9 145 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 MAP2K7O14733 419 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 POLR1CO15160 346 aaPredicted RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 NPHS1O60500 1241 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 PAFAH1B3Q15102 231 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ABHD17BQ5VST6 288 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ZNF101Q8IZC7 436 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ARMC10Q8N2F6 343 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 MRPL43Q8N983 215 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ANKLE1Q8NAG6 615 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 AGAP11Q8TF27 550 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 OR52A4PA6NMU1 304 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ZNF3P17036 446 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ACSL1P33121 698 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 SNU13P55769 128 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 EXOC3L2Q2M3D2 409 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 RFKQ969G6 155 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 F2RL3Q96RI0 385 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 FARSBQ9NSD9 589 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 TAS2R9Q9NYW1 312 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 SH3D21A4FU49 640 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 OR5K4A6NMS3 321 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 CD2P06729 351 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ERVK-8P63133 956 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 PLP2Q04941 152 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ULK3Q6PHR2 472 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 OR14L1PQ8NHC6 308 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 AP3S1Q92572 193 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 TRBC2A0A5B9 178 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 M0R2N6 131 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 VILLO15195 856 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 CSTBP04080 98 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 CBX3Q13185 183 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 TREML1Q86YW5 311 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 MSLNLQ96KJ4 702 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ACTL8Q9H568 366 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 ZDHHC7Q9NXF8 308 aa13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 PTRH2Q9Y3E5 179 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-208ENST00000558014 KIF13AQ9H1H9 1805 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 IRGMA1A4Y4 181 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 A6NLC8 198 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 SOCS5O75159 536 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 FAM163BP0C2L3 166 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 PFKLP17858 780 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 ACRV1P26436 265 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 AK4P27144 223 aaPredicted RBP13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 UFM1P61960 85 aa13.22□□□□□ -0.29
SEMA6D-208ENST00000558014 IL18R1Q13478 541 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms