RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 OR2T3Q8NH03 318 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 FGFBP3Q8TAT2 258 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 GANCQ8TET4 914 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 TMEM255BQ8WV15 326 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 DVL3Q92997 716 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 GLYATL1Q969I3 302 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 NCLNQ969V3 563 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 GIMAP5Q96F15 307 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 OXNAD1Q96HP4 312 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 DHTKD1Q96HY7 919 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 COG3Q96JB2 828 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 MARK4Q96L34 752 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 SENP8Q96LD8 212 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 FAM20AQ96MK3 541 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 TCEANC2Q96MN5 208 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 GPR137Q96N19 417 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 ZNF583Q96ND8 569 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 ALKBH7Q9BT30 221 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 TBC1D10AQ9BXI6 508 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 SLITRK6Q9H5Y7 841 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 YY1AP1Q9H869 796 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 NOX4Q9NPH5 578 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 HPS4Q9NQG7 708 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PDGFCQ9NRA1 345 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 OLFML3Q9NRN5 406 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 C1RLQ9NZP8 487 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 BCAP29Q9UHQ4 241 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PSORS1C1Q9UIG5 152 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 DAPK2Q9UIK4 370 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CNOT11Q9UKZ1 510 aaKnown RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 TNNQ9UQP3 1299 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 NSG2Q9Y328 171 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PTCH1Q13635 1447 aa3.53□□□□□ -1.85
TDP1-217ENST00000557782 A0A0G2JLL6 359 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 ANTXRLA6NF34 631 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ZNF814B7Z6K7 855 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 E9PI62 339 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 I6L893 689 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 PDXKO00764 312 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ADAM12O43184 909 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 WISP2O76076 250 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GAGE7O76087 117 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 KDM4BO94953 1096 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 LIPFP07098 398 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ASGR1P07306 291 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CA3P07451 260 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 APRTP07741 180 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GAGE12FP0CL80 117 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GAGE12GP0CL81 117 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GAGE12IP0CL82 117 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ANPEPP15144 967 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 B4GALT1P15291 398 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CEBPBP17676 345 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 S1PR1P21453 382 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GALP22466 123 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CFPP27918 469 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ALDH4A1P30038 563 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 C21orf33P30042 268 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 PPP2R1AP30153 589 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CHI3L1P36222 383 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 NKX2-1P43699 371 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 SLC6A8P48029 635 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 NR2C2P49116 596 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 NAPAP54920 295 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GEMP55040 296 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 MLLT10P55197 1068 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CLDN17P56750 224 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ACTR3P61158 418 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 DMPKQ09013 629 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 TRAP1Q12931 704 aaKnown RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 GAGE1Q13065 139 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GAGE4Q13068 117 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 BTG3Q14201 252 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 ADPRMQ3LIE5 342 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 POM121L1PQ3SYA9 428 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CFAP221Q4G0U5 840 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 AGKQ53H12 422 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CAVIN4Q5BKX8 364 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 C20orf194Q5TEA3 1177 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 METAP1DQ6UB28 335 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 Q6ZTK2 550 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ERASQ7Z444 233 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 BNIPLQ7Z465 357 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 NANOGNBQ7Z5D8 188 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 FAM131BQ86XD5 332 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GRAMD2AQ8IUY3 354 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GPALPP1Q8IXQ4 340 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ZNF34Q8IZ26 560 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 RNF113BQ8IZP6 322 aaKnown RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 GBP7Q8N8V2 638 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 COLGALT1Q8NBJ5 622 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 BHLHE23Q8NDY6 225 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 C7orf57Q8NEG2 295 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 TRPV3Q8NET8 790 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 OR11H4Q8NGC9 324 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 AKR7LQ8NHP1 331 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GOLGA5Q8TBA6 731 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 AGR3Q8TD06 166 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 SAP25Q8TEE9 199 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GIPC3Q8TF64 312 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms