RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TMEM114B3SHH9 223 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 HSPA4LO95757 839 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 TGFB1P01137 390 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SLC35G6P0C7Q6 338 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 RBMS1P29558 406 aaKnown RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SLC5A2P31639 672 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 HNRNPH1P31943 449 aaKnown RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SERPINB5P36952 375 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 GALNT1Q10472 559 aaPredicted RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 GRM7Q14831 915 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SH2D4BQ5SQS7 431 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 TMEM164Q5U3C3 297 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 CYB5D1Q6P9G0 228 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SCIMPQ6UWF3 145 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 BPHLQ86WA6 291 aaPredicted RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 TTLQ8NG68 377 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 ZCCHC10Q8TBK6 192 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 EML4Q9HC35 981 aaKnown RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 CDRT15L2A8MXV6 281 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 C4orf51C9J302 202 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 MANBAO00462 879 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 CRCPO75575 148 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 ETHE1O95571 254 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 B3GALT4O96024 378 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 PDYNP01213 254 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 ENO1P06733 434 aaKnown RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 HMOX2P30519 316 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 GCGRP47871 477 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 RPS13P62277 151 aaKnown RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 IFT88Q13099 833 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 PWP1Q13610 501 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 TLDC1Q6P9B6 456 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 TTLL10Q6ZVT0 673 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 PRSS41Q7RTY9 318 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 ZNF781Q8N8C0 355 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 NT5CQ8TCD5 201 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SLC6A16Q9GZN6 736 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 OR51B5Q9H339 312 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 ACTR5Q9H9F9 607 aaPredicted RBP14.55□□□□□ -0.08
NEDD1-213ENST00000557644 DMRT3Q9NQL9 472 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 ENAMQ9NRM1 1142 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 CUTCQ9NTM9 273 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SNX6Q9UNH7 406 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 PTGDR2Q9Y5Y4 395 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 SEC16AO15027 2179 aa14.55□□□□□ -0.08
NEDD1-213ENST00000557644 LRIT2A6NDA9 550 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 SAP18O00422 153 aaKnown RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 NVLO15381 856 aaKnown RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 SNNO75324 88 aaPredicted RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 CLEC3AO75596 197 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 STK17BO94768 372 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 SERPINA6P08185 405 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 ALAS2P22557 587 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 ABRAXAS2Q15018 415 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 C1orf189Q5VU69 101 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 TMEM214Q6NUQ4 689 aaKnown RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 METTL27Q8N6F8 245 aaPredicted RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 SELENOMQ8WWX9 145 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 REPS1Q96D71 796 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 F2RL3Q96RI0 385 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 NDC1Q9BTX1 674 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 SLC29A3Q9BZD2 475 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 SLC7A5P2Q9GIP4 190 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 TRAF6Q9Y4K3 522 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 PCDHB3Q9Y5E6 796 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 ZFHX4Q86UP3 3567 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 LAMA5O15230 3695 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 AZIN1O14977 448 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 RAB8AP61006 207 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 RGS1Q08116 209 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 TOR1AIP1Q5JTV8 583 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 ARFGAP2Q8N6H7 521 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 TTC29Q8NA56 475 aaPredicted RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 CKAP2Q8WWK9 683 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 NXPE2Q96DL1 559 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 CLIP3Q96DZ5 547 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 MAGEB10Q96LZ2 347 aaPredicted RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 TEFMQ96QE5 360 aaKnown RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 ZPBPQ9BS86 351 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 MS4A8Q9BY19 250 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 NLNQ9BYT8 704 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 AKIRIN1Q9H9L7 192 aaPredicted RBP14.54□□□□□ -0.08
NEDD1-213ENST00000557644 TSC22D4Q9Y3Q8 395 aa14.54□□□□□ -0.08
NEDD1-213ENST00000557644 A0A0G2JN53 185 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 ULK1O75385 1050 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 DXOO77932 396 aaKnown RBP14.53□□□□□ -0.08
NEDD1-213ENST00000557644 ZNF888P0CJ79 500 aaPredicted RBP14.53□□□□□ -0.08
NEDD1-213ENST00000557644 UROSP10746 265 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 IL1RNP18510 177 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 GSTM2P28161 218 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 PIK3CBP42338 1070 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 ZFAND4Q86XD8 727 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 TRIM42Q8IWZ5 723 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 SHISA5Q8N114 240 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 GALNT6Q8NCL4 622 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 FAM76AQ8TAV0 307 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 RAB3IL1Q8TBN0 382 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 MS4A6EQ96DS6 147 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 SEC16BQ96JE7 1060 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms