RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 MKRN2OSH3BPM6 223 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 I3L1I5 382 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-211ENST00000557623 K7EPI3 171 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 MAP2K7O14733 419 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 NDUFS4O43181 175 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 FOXS1O43638 330 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 RFPL1O75677 317 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 STATHP02808 62 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 SERPIND1P05546 499 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 UMODP07911 640 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 ZGLP1P0C6A0 271 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 GFAPP14136 432 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 GCAP28676 217 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 ALDH18A1P54886 795 aaKnown RBP11.86□□□□□ -0.51
SLIRP-211ENST00000557623 LAPTM5Q13571 262 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 HERC3Q15034 1050 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 HIST2H2ACQ16777 129 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-211ENST00000557623 XKR6Q5GH73 641 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 PAGE2BQ5JRK9 111 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 FAM69BQ5VUD6 431 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 HIST2H2AA3Q6FI13 130 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 METTL2BQ6P1Q9 378 aaKnown RBP11.86□□□□□ -0.51
SLIRP-211ENST00000557623 TMIGD1Q6UXZ0 262 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 ABHD13Q7L211 337 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 DTWD1Q8N5C7 304 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 KCT2Q8NC54 265 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 ZNF740Q8NDX6 193 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 STT3BQ8TCJ2 826 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 ESAMQ96AP7 390 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 PTCD3Q96EY7 689 aaKnown RBP11.86□□□□□ -0.51
SLIRP-211ENST00000557623 SCYL1Q96KG9 808 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 FER1L6-AS2Q96M78 137 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 GPR78Q96P69 363 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 EFCAB11Q9BUY7 163 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 SPNS1Q9H2V7 528 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 EPB41L4BQ9H329 900 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 SOX17Q9H6I2 414 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-211ENST00000557623 COPG2Q9UBF2 871 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 OPTCQ9UBM4 332 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 TRPC4Q9UBN4 977 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 CTSFQ9UBX1 484 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 TNPO3Q9Y5L0 923 aaKnown RBP11.86□□□□□ -0.51
SLIRP-211ENST00000557623 ITPR1Q14643 2758 aa11.86□□□□□ -0.51
SLIRP-211ENST00000557623 LOC400499M0QZD8 3231 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 ARGFXA6NJG6 315 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 PCDH17O14917 1159 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 KLK8O60259 260 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 SERPINA6P08185 405 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 MTHFD2P13995 350 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 MMP11P24347 488 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 VARSP26640 1264 aaKnown RBP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 HPDP32754 393 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 IRF8Q02556 426 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 ATP1A4Q13733 1029 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 SLBPQ14493 270 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 NAA30Q147X3 362 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 SETDB1Q15047 1291 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 TBCCQ15814 346 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 PFKFB4Q16877 469 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 FBXO48Q5FWF7 155 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 TECRLQ5HYJ1 363 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 LYPD8Q6UX82 237 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 MRGPREQ86SM8 312 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 LCA5Q86VQ0 697 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 PLD6Q8N2A8 252 aaKnown RBP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 AMER3Q8N944 861 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 OR9A4Q8NGU2 314 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 ZCCHC10Q8TBK6 192 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 WDR34Q96EX3 536 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 MACROD1Q9BQ69 325 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 CRB3Q9BUF7 120 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 TGIF2Q9GZN2 237 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 ING2Q9H160 280 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 SLC25A18Q9H1K4 315 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 CPSF2Q9P2I0 782 aaKnown RBP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 G3BP2Q9UN86 482 aaKnown RBP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 MRPS2Q9Y399 296 aaKnown RBP11.85□□□□□ -0.51
SLIRP-211ENST00000557623 ANGPTL3Q9Y5C1 460 aa11.85□□□□□ -0.51
SLIRP-211ENST00000557623 MED13Q9UHV7 2174 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 ANKDD1BA6NHY2 528 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 AGPSO00116 658 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 SMIM24O75264 130 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 EPB42P16452 691 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 ALOX12P18054 663 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 IL1RNP18510 177 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 PIK3CGP48736 1102 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 AGTR2P50052 363 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 STXBP1P61764 594 aaKnown RBP11.84□□□□□ -0.51
SLIRP-211ENST00000557623 KLC1Q07866 573 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 C19orf57Q0VDD7 668 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 CHIT1Q13231 466 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 DOC2AQ14183 400 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 PCBP2Q15366 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
SLIRP-211ENST00000557623 RBBP7Q16576 425 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 VWA2Q5GFL6 755 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 PPP1R32Q7Z5V6 425 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 AFAP1L2Q8N4X5 818 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 ANKRD53Q8N9V6 530 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 CLEC1AQ8NC01 280 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 C9orf43Q8TAL5 461 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms