RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MYBL2P10244 700 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 PAMP19021 973 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 TPP2P29144 1249 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-210ENST00000557431 CXCR5P32302 372 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 HSD17B2P37059 387 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 AGTR2P50052 363 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 OR4D2P58180 307 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 GPS1Q13098 491 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 NAE1Q13564 534 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 THOC5Q13769 683 aaKnown RBP13.23□□□□□ -0.29
SLIRP-210ENST00000557431 PTK6Q13882 451 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 SLC25A25Q6KCM7 469 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 MEX3BQ6ZN04 569 aaKnown RBP13.23□□□□□ -0.29
SLIRP-210ENST00000557431 CTAGE6Q86UF2 777 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 ZNF227Q86WZ6 799 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 CYP4X1Q8N118 509 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 TMEM178AQ8NBL3 297 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 M1APQ8TC57 530 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 MCOLN3Q8TDD5 553 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 SLC13A3Q8WWT9 602 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 SREK1Q8WXA9 508 aaKnown RBP13.23□□□□□ -0.29
SLIRP-210ENST00000557431 TM4SF19Q96DZ7 209 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 LPAR4Q99677 370 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 EBNA1BP2Q99848 306 aaKnown RBP13.23□□□□□ -0.29
SLIRP-210ENST00000557431 CCDC68Q9H2F9 335 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 INTS10Q9NVR2 710 aaKnown RBP13.23□□□□□ -0.29
SLIRP-210ENST00000557431 PDE10AQ9Y233 779 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 NEU2Q9Y3R4 380 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 ASB1Q9Y576 335 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 NINQ8N4C6 2090 aa13.23□□□□□ -0.29
SLIRP-210ENST00000557431 ZCWPW2A0A1B0GU75 182 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 NDC80O14777 642 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 B4GALT2O60909 372 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 CDC25BP30305 580 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 BTG2P78543 158 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 TIAL1Q01085 375 aaKnown RBP eCLIP13.22□□□□□ -0.29
SLIRP-210ENST00000557431 RELAQ04206 551 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 HYAL2Q12891 473 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 EXT1Q16394 746 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 PHKG1Q16816 387 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 CAPN13Q6MZZ7 669 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-210ENST00000557431 DRICH1Q6PGQ1 229 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-210ENST00000557431 AGTRAPQ6RW13 159 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 CDH24Q86UP0 819 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 C17orf64Q86WR6 236 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 TXLNBQ8N3L3 684 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 RNF10Q8N5U6 811 aaKnown RBP13.22□□□□□ -0.29
SLIRP-210ENST00000557431 CAMKVQ8NCB2 501 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 ZNF740Q8NDX6 193 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 PLPP5Q8NEB5 264 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 EEF1AKMT1Q8WVE0 214 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 DMRTA2Q96SC8 542 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 AARSD1Q9BTE6 412 aaKnown RBP13.22□□□□□ -0.29
SLIRP-210ENST00000557431 C20orf96Q9NUD7 363 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-210ENST00000557431 SAMD15Q9P1V8 674 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 SLC17A6Q9P2U8 582 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 PPT2Q9UMR5 302 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
SLIRP-210ENST00000557431 SPG11Q96JI7 2443 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 ZFHX3Q15911 3703 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 KCNE1BA0A087WTH5 132 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 AP3B1O00203 1094 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 NDUFS4O43181 175 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 CEP104O60308 925 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 CDC40O60508 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
SLIRP-210ENST00000557431 SLC25A12O75746 678 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 ZNF24P17028 368 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 SSTR2P30874 369 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 ITGA8P53708 1063 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 TESK1Q15569 626 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 DEFB134Q4QY38 66 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 KRTCAP3Q53RY4 240 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 RBM20Q5T481 1227 aaKnown RBP13.21□□□□□ -0.29
SLIRP-210ENST00000557431 TTC27Q6P3X3 843 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 CEP128Q6ZU80 1094 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 CD163Q86VB7 1156 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 RPS19BP1Q86WX3 136 aaKnown RBP13.21□□□□□ -0.29
SLIRP-210ENST00000557431 GHDCQ8N2G8 530 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 RPRMLQ8N4K4 120 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 SLC5A8Q8N695 610 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 ELP5Q8TE02 316 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 KCNJ9Q92806 393 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 GPAMQ9HCL2 828 aa13.21□□□□□ -0.29
SLIRP-210ENST00000557431 IARS2Q9NSE4 1012 aaKnown RBP13.21□□□□□ -0.29
SLIRP-210ENST00000557431 PRRC2AP48634 2157 aaKnown RBP13.21□□□□□ -0.3
SLIRP-210ENST00000557431 FAM237BA0A1B0GVD1 139 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 NKX2-6A6NCS4 301 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 FAM90A27PA6NNH2 459 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 MAGEB17A8MXT2 336 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 C4orf51C9J302 202 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 CHST10O43529 356 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 OR1F1O43749 312 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 NME2P1O60361 137 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 BANF1O75531 89 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 KRT14P02533 472 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 TPOP07202 933 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms