RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 B4GALT2O60909 372 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 ATG12O94817 140 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 UQCRC2P22695 453 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 FADDQ13158 208 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 E2F2Q14209 437 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 OR52E8Q6IFG1 317 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 SYCE2Q6PIF2 218 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 C17orf99Q6UX52 265 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 GID4Q8IVV7 300 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.1□□□□□ -1.114e-6■■□□□ 12.7
CHD8-213ENST00000557364 ZNF100Q8IYN0 542 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 TCEAL8Q8IYN2 117 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 UMODL1-AS1Q8N2C9 162 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 ZNF565Q8N9K5 539 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 HAVCR2Q8TDQ0 301 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 HLA-CQ95604 372 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 COL21A1Q96P44 957 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 PITHD1Q9GZP4 211 aaPredicted RBP8.1□□□□□ -1.11
CHD8-213ENST00000557364 GMFGO60234 142 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 CBFA2T3O75081 653 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 LEFTY1O75610 366 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 KCNK5O95279 499 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 TGFB1P01137 390 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 S100A9P06702 114 aaKnown RBP8.1□□□□□ -1.11
CHD8-213ENST00000557364 CDH1P12830 882 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 CYBAP13498 195 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 PGCP20142 388 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 PTDSS1P48651 473 aaKnown RBP8.1□□□□□ -1.11
CHD8-213ENST00000557364 SEPHS1P49903 392 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 ARFRP1Q13795 201 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 SYPL2Q5VXT5 272 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 RANBP9Q96S59 729 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 C16orf70Q9BSU1 422 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 STOML2Q9UJZ1 356 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 CA14Q9ULX7 337 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 SLC22A14Q9Y267 594 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 AP1M2Q9Y6Q5 423 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 FAM172BPA6NC97 362 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 CHRNB2P17787 502 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 GLP1RP43220 463 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 MRPS21P82921 87 aaKnown RBP8.1□□□□□ -1.11
CHD8-213ENST00000557364 FOLH1Q04609 750 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 LYSMD4Q5XG99 296 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 REEP3Q6NUK4 255 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 ULK3Q6PHR2 472 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 SMARCD3Q6STE5 483 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 C14orf80Q86SX3 495 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 ZNF227Q86WZ6 799 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 RALGPS2Q86X27 583 aaPredicted RBP8.1□□□□□ -1.11
CHD8-213ENST00000557364 CILP2Q8IUL8 1156 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 PACRGLQ8N7B6 248 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 ZNF689Q96CS4 500 aaPredicted RBP8.1□□□□□ -1.11
CHD8-213ENST00000557364 DHRS1Q96LJ7 313 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 LPAR4Q99677 370 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 OR51V1Q9H2C8 321 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 TIMMDC1Q9NPL8 285 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 FZD4Q9ULV1 537 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 WDR45Q9Y484 360 aa8.1□□□□□ -1.11
CHD8-213ENST00000557364 PRSS51A0A1B0GVH4 220 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 C1orf226A1L170 272 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 NIPSNAP2O75323 286 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 ZNF432O94892 652 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 OXSR1O95747 527 aaPredicted RBP8.09□□□□□ -1.11
CHD8-213ENST00000557364 HNRNPA2B1P22626 353 aaKnown RBP8.09□□□□□ -1.11
CHD8-213ENST00000557364 RRADP55042 308 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 ARHGAP8P85298 464 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 NRG1Q02297 640 aaPredicted RBP8.09□□□□□ -1.11
CHD8-213ENST00000557364 KCNC4Q03721 635 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 TRAM2Q15035 370 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 TMEM225Q6GV28 225 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 CLNKQ7Z7G1 428 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 LIX1LQ8IVB5 337 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 TOR1AIP2Q8NFQ8 470 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 GATA5Q9BWX5 397 aaPredicted RBP8.09□□□□□ -1.11
CHD8-213ENST00000557364 YTHDF1Q9BYJ9 559 aaKnown RBP8.09□□□□□ -1.11
CHD8-213ENST00000557364 SEC61A2Q9H9S3 476 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 GABRQQ9UN88 632 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 L7N2F9 121 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 BRINP1O60477 761 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 EDNRBP24530 442 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 VAMP2P63027 116 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 SLITRK4Q8IW52 837 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 ANKRA2Q9H9E1 313 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 CD248Q9HCU0 757 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 SLC17A7Q9P2U7 560 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 RGPD1P0DJD0 1748 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 VSTM2BA6NLU5 285 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 KHNYNO15037 678 aaKnown RBP8.09□□□□□ -1.11
CHD8-213ENST00000557364 ICAM2P13598 275 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 F8A1P23610 371 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 SLC6A4P31645 630 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 DNAJB13P59910 316 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 TUBA3CQ13748 450 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 MLC1Q15049 377 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 NR0B2Q15466 257 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 GRHL2Q6ISB3 625 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 NOXRED1Q6NXP6 359 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 IQCHQ86VS3 1027 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 HEATR4Q86WZ0 1026 aa8.09□□□□□ -1.11
CHD8-213ENST00000557364 IQCF2Q8IXL9 164 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms