RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 KLC1Q07866 573 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 KLRB1Q12918 225 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 NFATC3Q12968 1075 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 BMPR2Q13873 1038 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 EFTUD2Q15029 972 aaKnown RBP eCLIP7.45□□□□□ -1.22
PSEN1-222ENST00000557356 RASA2Q15283 850 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 PFKFB4Q16877 469 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 TUBB8Q3ZCM7 444 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 TMEM35AQ53FP2 167 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 ATP1A1-AS1Q5TC04 95 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 LIPJQ5W064 366 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 ATG14Q6ZNE5 492 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 ASB18Q6ZVZ8 466 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 CHSY3Q70JA7 882 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 PLD3Q8IV08 490 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 CENPLQ8N0S6 344 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-222ENST00000557356 ZNF843Q8N446 348 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 ARHGEF39Q8N4T4 335 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 TEX19Q8NA77 164 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 KCT2Q8NC54 265 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 ARMC2Q8NEN0 867 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 OR9A4Q8NGU2 314 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 OR51Q1Q8NH59 317 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 ADAMTS18Q8TE60 1221 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 UBTD2Q8WUN7 234 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 DCAKDQ8WVC6 231 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 KCTD4Q8WVF5 259 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 SCYL1Q96KG9 808 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 BBC3Q96PG8 261 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-222ENST00000557356 SPSB2Q99619 263 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 MRPL57Q9BQC6 102 aaKnown RBP7.45□□□□□ -1.22
PSEN1-222ENST00000557356 NPLQ9BXD5 320 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-222ENST00000557356 MRPL46Q9H2W6 279 aaKnown RBP7.45□□□□□ -1.22
PSEN1-222ENST00000557356 PRM3Q9NNZ6 103 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 MLXIPLQ9NP71 852 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 GPR83Q9NYM4 423 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 PSMC3IPQ9P2W1 217 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-222ENST00000557356 DCDC2Q9UHG0 476 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 PCDHGA11Q9Y5H2 935 aa7.45□□□□□ -1.22
PSEN1-222ENST00000557356 PKD1L2Q7Z442 2459 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 NSG1A0A0A6YYJ2 146 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 TRIM49D1C9J1S8 452 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 STX16-NPEPL1H3BU86 382 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 PSMD12O00232 456 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 CLDN4O14493 209 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 STX16O14662 325 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 TAPBPO15533 448 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 KLK8O60259 260 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 NRP2O60462 931 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 GALR3O60755 368 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 KLHL18O94889 574 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 BMP10O95393 424 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 PIK3CBP42338 1070 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 MAGEA12P43365 314 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 KCNC1P48547 511 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 CCT5P48643 541 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 ARFIP1P53367 373 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 NFKB2Q00653 900 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 CHIT1Q13231 466 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 ATP1A4Q13733 1029 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 DOC2AQ14183 400 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 E2F2Q14209 437 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 SLBPQ14493 270 aaKnown RBP eCLIP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 NAA30Q147X3 362 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 MYBPC3Q14896 1274 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 SETDB1Q15047 1291 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 PCBP2Q15366 365 aaKnown RBP eCLIP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 MFSD4BQ5TF39 518 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 VWA5B1Q5TIE3 1220 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 JMJD6Q6NYC1 403 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 MED27Q6P2C8 311 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 TRIM40Q6P9F5 258 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 KIRREL2Q6UWL6 708 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 RIPOR1Q6ZS17 1223 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 COX15Q7KZN9 410 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 NDUFAF7Q7L592 441 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 SLC22A9Q8IVM8 553 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 GALNT16Q8N428 558 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 AFAP1L2Q8N4X5 818 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 TEX9Q8N6V9 391 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 AMER3Q8N944 861 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 PLPP5Q8NEB5 264 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 UHMK1Q8TAS1 419 aaKnown RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 UBLCP1Q8WVY7 318 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 EXT2Q93063 718 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 ATP6V1E2Q96A05 226 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 GAL3ST3Q96A11 431 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 CCDC126Q96EE4 140 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 SMAD5Q99717 465 aaKnown RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 TXLNGYQ9BZA5 131 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 UNKQ9C0B0 810 aaKnown RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 SLC6A16Q9GZN6 736 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 RHBGQ9H310 441 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 SOX17Q9H6I2 414 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-222ENST00000557356 ACTR8Q9H981 624 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 RIC8BQ9NVN3 520 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 PSD3Q9NYI0 1048 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 CTSFQ9UBX1 484 aa7.44□□□□□ -1.22
PSEN1-222ENST00000557356 RALYQ9UKM9 306 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms