RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PPANQ9NQ55 473 aaKnown RBP14.97□□□□□ -0.01
TUBB3-213ENST00000557262 COPG2Q9UBF2 871 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 PCDHGB6Q9Y5F9 930 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 TRGV8A0A0C4DH27 118 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 TRBC2A0A5B9 178 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 ENO4A6NNW6 628 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 MAGEB17A8MXT2 336 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 ZSCAN12O43309 604 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 HNRNPRO43390 633 aaKnown RBP14.96□□□□□ -0.01
TUBB3-213ENST00000557262 IVDP26440 423 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 MEF2AQ02078 507 aaPredicted RBP14.96□□□□□ -0.01
TUBB3-213ENST00000557262 RHAGQ02094 409 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 SRSF11Q05519 484 aaKnown RBP14.96□□□□□ -0.01
TUBB3-213ENST00000557262 CSHL1Q14406 222 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 ABRAXAS2Q15018 415 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 HECTD2Q5U5R9 776 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 NIPAL1Q6NVV3 410 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 PAPD4Q6PIY7 484 aaKnown RBP14.96□□□□□ -0.01
TUBB3-213ENST00000557262 STRA8Q7Z7C7 330 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 CPAMD8Q8IZJ3 1885 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 PDIK1LQ8N165 341 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 GPATCH11Q8N954 259 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 ZNF740Q8NDX6 193 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 FBXL8Q96CD0 374 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 MOCOSQ96EN8 888 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 PDLIM5Q96HC4 596 aaKnown RBP14.96□□□□□ -0.01
TUBB3-213ENST00000557262 OR4K3Q96R72 315 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 SCN2AQ99250 2005 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 LANCL2Q9NS86 450 aa14.96□□□□□ -0.01
TUBB3-213ENST00000557262 CORO1CQ9ULV4 474 aaPredicted RBP14.96□□□□□ -0.01
TUBB3-213ENST00000557262 ZNF860A6NHJ4 632 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 PRSS44E7EML9 344 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 TTI1O43156 1089 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 NDUFS4O43181 175 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 CHST10O43529 356 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 GALR3O60755 368 aaPredicted RBP14.95□□□□□ -0.02
TUBB3-213ENST00000557262 CDC123O75794 336 aaPredicted RBP14.95□□□□□ -0.02
TUBB3-213ENST00000557262 GUCA1CO95843 209 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 SERPIND1P05546 499 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 FHP07954 510 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 ENO2P09104 434 aaPredicted RBP14.95□□□□□ -0.02
TUBB3-213ENST00000557262 ALOX12P18054 663 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 CD96P40200 585 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 ELK3P41970 407 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 PGGT1BP53609 377 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 OR4D2P58180 307 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 SKP1P63208 163 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 RBPJQ06330 500 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 RGS1Q08116 209 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 ART3Q13508 389 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 TUBA3CQ13748 450 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 CATSPEREQ5SY80 951 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 FAM45BPQ6NSW5 357 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 TUBA3EQ6PEY2 450 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 CRLF3Q8IUI8 442 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 OR5T3Q8NGG3 340 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 FAM45AQ8TCE6 357 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 TBC1D20Q96BZ9 403 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 UTP23Q9BRU9 249 aaKnown RBP14.95□□□□□ -0.02
TUBB3-213ENST00000557262 PLAC1Q9HBJ0 212 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 SUCOQ9UBS9 1254 aaKnown RBP14.95□□□□□ -0.02
TUBB3-213ENST00000557262 ZFP69BQ9UJL9 534 aa14.95□□□□□ -0.02
TUBB3-213ENST00000557262 CCL21O00585 134 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 DNAJB6O75190 326 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 JAK1P23458 1154 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 CA7P43166 264 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 TAS2R50P59544 299 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 PMP22Q01453 160 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 USP10Q14694 798 aaKnown RBP14.94□□□□□ -0.02
TUBB3-213ENST00000557262 MORF4L2Q15014 288 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 DEFB134Q4QY38 66 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 HP1BP3Q5SSJ5 553 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-213ENST00000557262 MTFR2Q6P444 385 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 MYO7BQ6PIF6 2116 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 SYDE1Q6ZW31 735 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-213ENST00000557262 SLC5A8Q8N695 610 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 MDS2Q8NDY4 140 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 NT5CQ8TCD5 201 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 ITLN2Q8WWU7 325 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-213ENST00000557262 SLC5A11Q8WWX8 675 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 TSLPQ969D9 159 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 NEIL2Q969S2 332 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 MARVELD3Q96A59 401 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 LRRC39Q96DD0 335 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 CFAP36Q96G28 342 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 SIGLEC12Q96PQ1 595 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 NPAS2Q99743 824 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 OLFM1Q99784 485 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 RBCK1Q9BYM8 510 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 CLK4Q9HAZ1 481 aaKnown RBP14.94□□□□□ -0.02
TUBB3-213ENST00000557262 SLC17A6Q9P2U8 582 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 LRBAP50851 2863 aa14.94□□□□□ -0.02
TUBB3-213ENST00000557262 ARHGAP10A1A4S6 786 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 URADA6NGE7 173 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 CDK2AP1O14519 115 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 MAN1A2O60476 641 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 WISP2O76076 250 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 MLYCDO95822 493 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 CD46P15529 392 aa14.93□□□□□ -0.02
TUBB3-213ENST00000557262 TCP1P17987 556 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms