RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 TPOP07202 933 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 PNMA6AP0CW24 399 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 DESP17661 470 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 HLA-DPA1P20036 260 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 LMO1P25800 156 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 PEX19P40855 299 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 CD86P42081 329 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 NSG1P42857 185 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 KIR2DL3P43628 341 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 RAB28P51157 221 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 MECP2P51608 486 aaKnown RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 DLX5P56178 289 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ITKQ08881 620 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 GTF2H3Q13889 308 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 KEAP1Q14145 624 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 NFE2L1Q14494 772 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 KRT33BQ14525 404 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 DAZAP2Q15038 168 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ZIC1Q15915 447 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 CAMK4Q16566 473 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 CA9Q16790 459 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ATP13A4Q4VNC1 1196 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF766Q5HY98 468 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 KLHDC7AQ5VTJ3 777 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 PRAMEF9Q5VWM5 478 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ABHD17CQ6PCB6 329 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 TMEM220Q6QAJ8 160 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ARSKQ6UWY0 536 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 PRSS57Q6UWY2 283 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 C3P1Q6ZMU1 363 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 PHF13Q86YI8 300 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ADGRF3Q8IZF5 1079 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 MARVELD2Q8N4S9 558 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 SIRT6Q8N6T7 355 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 RASGEF1AQ8N9B8 481 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ARRDC2Q8TBH0 407 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 NELFBQ8WX92 580 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 FATE1Q969F0 183 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 SMARCE1Q969G3 411 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 C12orf66Q96MD2 445 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 SECISBP2Q96T21 854 aaKnown RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 CCM2Q9BSQ5 444 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 MLST8Q9BVC4 326 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 SELENOOQ9BVL4 669 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 SARGQ9BW04 601 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 TDRD1Q9BXT4 1180 aaKnown RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ADGRE3Q9BY15 652 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 VPS16Q9H269 839 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 DHX35Q9H5Z1 703 aaKnown RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF160Q9HCG1 818 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 NT5MQ9NPB1 228 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 HAUS2Q9NVX0 235 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 BEX4Q9NWD9 120 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 TEKT2Q9UIF3 430 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 PLCL2Q9UPR0 1127 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 RNF6Q9Y252 685 aa4.46□□□□□ -1.7
SCFD1-223ENST00000557076 CFAP20Q9Y6A4 193 aaKnown RBP4.46□□□□□ -1.7
SCFD1-223ENST00000557076 FAM170AA1A519 330 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 SYT5O00445 386 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 BTN3A1O00481 513 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 MAP2K7O14733 419 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 DSCR3O14972 297 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 B3GALT2O43825 422 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 F10P00742 488 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 IFNA2P01563 188 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 CALB1P05937 261 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 PVRP15151 417 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 CHRNB2P17787 502 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 NSFP46459 744 aaKnown RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 CD151P48509 253 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 RPL7AP62424 266 aaKnown RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 PMP22Q01453 160 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 FMO1Q01740 532 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 CDR2Q01850 454 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 KLC1Q07866 573 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 NIPAL4Q0D2K0 466 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 PMPCAQ10713 525 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 MAN2A1Q16706 1144 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 FAM214AQ32MH5 1076 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 ATP13A5Q4VNC0 1218 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 LDLRAP1Q5SW96 308 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 ABHD17BQ5VST6 288 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 KLHL10Q6JEL2 608 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 HIBCHQ6NVY1 386 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 H3F3CQ6NXT2 135 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 PODNL1Q6PEZ8 512 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 SPESP1Q6UW49 350 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 TMCO3Q6UWJ1 677 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 PAMR1Q6UXH9 720 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 COX15Q7KZN9 410 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 FGD2Q7Z6J4 655 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 HOOK3Q86VS8 718 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 AMIGO1Q86WK6 493 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 PAQR7Q86WK9 346 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 ZZZ3Q8IYH5 903 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 LPCAT1Q8NF37 534 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 OR2L2Q8NH16 312 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms