RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 IL36AQ9UHA7 158 aa3.92□□□□□ -1.78
PRPF39-210ENST00000556718 TRMT6Q9UJA5 497 aaKnown RBP3.92□□□□□ -1.78
PRPF39-210ENST00000556718 GRID1Q9ULK0 1009 aa3.92□□□□□ -1.78
PRPF39-210ENST00000556718 KCNJ14Q9UNX9 436 aa3.92□□□□□ -1.78
PRPF39-210ENST00000556718 NCKAP1Q9Y2A7 1128 aa3.92□□□□□ -1.78
PRPF39-210ENST00000556718 RIPK3Q9Y572 518 aa3.92□□□□□ -1.78
PRPF39-210ENST00000556718 COLEC10Q9Y6Z7 277 aa3.92□□□□□ -1.78
PRPF39-210ENST00000556718 EEA1Q15075 1411 aa3.92□□□□□ -1.78
PRPF39-210ENST00000556718 IGLV9-49A0A0B4J1Y8 123 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 ARHGAP42A6NI28 874 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 E5RGE8 158 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 M0R296 226 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 TXNL1O43396 289 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 SLC4A1P02730 911 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 IGHV4-38-2P0DP08 117 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 DLATP10515 647 aaKnown RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 KRT3P12035 628 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 F3P13726 295 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 DARSP14868 501 aaKnown RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 LIFP15018 202 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 AHCYP23526 432 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 CLDN17P56750 224 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 POU3F1Q03052 451 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 WRNQ14191 1432 aaPredicted RBP eCLIP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 CCDC40Q4G0X9 1142 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 ZNF542PQ5EBM4 170 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 KLHL10Q6JEL2 608 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 B3GLCTQ6Y288 498 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 IL17RELQ6ZVW7 336 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 ASPGQ86U10 573 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 NFE4Q86UQ8 179 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 GBP7Q8N8V2 638 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 MRPL43Q8N983 215 aaKnown RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 ZNF383Q8NA42 475 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 LEMD2Q8NC56 503 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 OR7A2PQ8NGA2 310 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 EXOC6Q8TAG9 804 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 GGHQ92820 318 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 C4orf45Q96LM5 186 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 ZNF354BQ96LW1 612 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 CDCA3Q99618 268 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 PKP2Q99959 881 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 DDX50Q9BQ39 737 aaKnown RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 ALKBH7Q9BT30 221 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 PITPNM3Q9BZ71 974 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 XPO4Q9C0E2 1151 aaKnown RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 SLC39A8Q9C0K1 460 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 DONSONQ9NYP3 566 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 EPS15L1Q9UBC2 864 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 TRIM10Q9UDY6 481 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 UBQLN2Q9UHD9 624 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 PIN4Q9Y237 131 aaKnown RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 FOXA2Q9Y261 457 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-210ENST00000556718 NSG2Q9Y328 171 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 TEX264Q9Y6I9 313 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 KIAA1217Q5T5P2 1943 aa3.91□□□□□ -1.78
PRPF39-210ENST00000556718 TMEM129A0AVI4 362 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 ANKDD1BA6NHY2 528 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 C2CD4DB7Z1M9 353 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 MAGEB2O15479 319 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 DFFBO76075 338 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 RAF1P04049 648 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 GSTA2P09210 222 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 PRKAR1AP10644 381 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 AREGP15514 252 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 AMD1P17707 334 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 ELAVL4P26378 380 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 ALDH1B1P30837 517 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 ATXN3P54252 364 aaPredicted RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 HUNKP57058 714 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 B3GALT5-AS1P59052 145 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 GPR17Q13304 367 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 SGCGQ13326 291 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 PDE7AQ13946 482 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 GAMTQ14353 236 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 RBM39Q14498 530 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 ZRSR1Q15695 479 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 HSP90AA5PQ58FG0 334 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 TAF3Q5VWG9 929 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 ZNF770Q6IQ21 691 aaPredicted RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 CD164L2Q6UWJ8 174 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 SIGLEC15Q6ZMC9 328 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 ANO5Q75V66 913 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 MARK2Q7KZI7 788 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 KDM8Q8N371 416 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 SMYD1Q8NB12 490 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 CCNYQ8ND76 341 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 KIAA1524Q8TCG1 905 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 RNASE8Q8TDE3 154 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 PIK3R3Q92569 461 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 TAF15Q92804 592 aaKnown RBP eCLIP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 LGALS12Q96DT0 336 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 RBM41Q96IZ5 413 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 NSMCE2Q96MF7 247 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 FAM111AQ96PZ2 611 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 PRMT1Q99873 361 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 LRRC2Q9BYS8 371 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 TMEM245Q9H330 911 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms