RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 ASIC2Q16515 512 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 SNRNP35Q16560 246 aaKnown RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 MAPK6Q16659 721 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 EXOC3L4Q17RC7 722 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 KIF19Q2TAC6 998 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 RAD9BQ6WBX8 426 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 ASB18Q6ZVZ8 466 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 APTXQ7Z2E3 356 aaKnown RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 KIAA1328Q86T90 577 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 SATL1Q86VE3 508 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 CDR2LQ86X02 465 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 CBWD2Q8IUF1 395 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 SPATA2LQ8IUW3 424 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 ZC3H3Q8IXZ2 948 aaKnown RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 CLEC18CQ8NCF0 446 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 TRPV1Q8NER1 839 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 LILRB1Q8NHL6 650 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 SPATA22Q8NHS9 363 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 CCDC127Q96BQ5 260 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 CCDC51Q96ER9 411 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 MED30Q96HR3 178 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 CPB2Q96IY4 423 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 THOC3Q96J01 351 aaKnown RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 C16orf45Q96MC5 204 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 RAB3IPQ96QF0 476 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 ERGIC2Q96RQ1 377 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 SLC22A12Q96S37 553 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 DESI2Q9BSY9 194 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 MTG1Q9BT17 334 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 NUP85Q9BW27 656 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 ST6GALNAC4Q9H4F1 302 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 CNOT10Q9H9A5 744 aaKnown RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 EQTNQ9NQ60 294 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 PRMT7Q9NVM4 692 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 MIOSQ9NXC5 875 aa3.99□□□□□ -1.77
TRAV15-201ENST00000556680 RBAKQ9NYW8 714 aaPredicted RBP3.99□□□□□ -1.77
TRAV15-201ENST00000556680 VWA8A3KMH1 1905 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 MIA3Q5JRA6 1907 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 SAA2-SAA4A0A096LPE2 208 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 TTC26A0AVF1 554 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 ZNF233A6NK53 670 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 LRRIQ3A6PVS8 624 aaPredicted RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 HEPACAM2A8MVW5 462 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 KBTBD13C9JR72 458 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 ZNF587BE7ETH6 402 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 CLDN3O15551 220 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 ZSCAN12O43309 604 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 EXTL3O43909 919 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 WDR1O75083 606 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 LDB3O75112 727 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 DUSP11O75319 330 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 CSDE1O75534 798 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 TNNC2P02585 160 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 CYBAP13498 195 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 ITGA2P17301 1181 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 MAP2K2P36507 400 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 GCLMP48507 274 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 MLLT10P55197 1068 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 NLRP11P59045 1033 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 BRWD1-AS2P59051 145 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 SNRPFP62306 86 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 RELQ04864 619 aaPredicted RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 CYP24A1Q07973 514 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 NCBP1Q09161 790 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 MTF1Q14872 753 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 PTPN14Q15678 1187 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 KRBOX4Q5JUW0 171 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 RNASEH2BQ5TBB1 312 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 ATF7IP2Q5U623 682 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 SFMBT2Q5VUG0 894 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 FAM109BQ6ICB4 259 aaPredicted RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 SLC39A4Q6P5W5 647 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 GFRALQ6UXV0 394 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 UNQ6126/PRO20091Q6UXV3 157 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 Q75L30 129 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 CATSPER4Q7RTX7 472 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 CENPVQ7Z7K6 275 aaPredicted RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 TMEM219Q86XT9 240 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 MFN1Q8IWA4 741 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 THNSL1Q8IYQ7 743 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 RBMXL3Q8N7X1 1067 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 SLC4A11Q8NBS3 891 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 PAPD5Q8NDF8 572 aaKnown RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 Q8NFD4 153 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 OR8K1Q8NGG5 319 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 OR2AJ1Q8NGZ0 328 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 KIF18AQ8NI77 898 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 BBS10Q8TAM1 723 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 NUDCD2Q8WVJ2 157 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 DNAJB3Q8WWF6 145 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 SLAMF9Q96A28 289 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 OXNAD1Q96HP4 312 aaPredicted RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 ANKRD36BP1Q96IX9 119 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 LYZL4Q96KX0 146 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 LINC00615Q96LM1 132 aaPredicted RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 ZNF582Q96NG8 517 aaPredicted RBP3.98□□□□□ -1.77
TRAV15-201ENST00000556680 PANX2Q96RD6 677 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 SEPHS2Q99611 448 aa3.98□□□□□ -1.77
TRAV15-201ENST00000556680 OLFM1Q99784 485 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms