RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 KIAA1161Q6NSJ0 714 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 SERPINA13PQ6UXR4 307 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 ASB18Q6ZVZ8 466 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 OR8H3Q8N146 312 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 DCAF4L2Q8NA75 395 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 KAT2AQ92830 837 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 MUL1Q969V5 352 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 RIOK2Q9BVS4 552 aaKnown RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 OR51B5Q9H339 312 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 RCVRNP35243 200 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 HNF1BP35680 557 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 ATP13A5Q4VNC0 1218 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 RUNDC3AQ59EK9 446 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 CLECL1Q8IZS7 167 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 GJD3Q8N144 294 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 MEIOBQ8N635 442 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 OR6Q1Q8NGQ2 317 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 PTPN18Q99952 460 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 BEX2Q9BXY8 128 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 LTBP3Q9NS15 1303 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 GPRC5BQ9NZH0 403 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 A0A0U1RQS6 177 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 WASH4PA8MWX3 477 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 PI15O43692 258 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 OR1F1O43749 312 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 SP140Q13342 867 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 ARRDC2Q8TBH0 407 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 TTYH2Q9BSA4 534 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 CSNK1G1Q9HCP0 422 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 IMP3Q9NV31 184 aaKnown RBP14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 OSER1Q9NX31 292 aa14.52□□□□□ -0.08
ARHGEF40-207ENST00000556399 MBLAC1A4D2B0 266 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 FUCA1P04066 466 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF10P21506 573 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 ARNTP27540 789 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 NR4A2P43354 598 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 CRISP3P54108 245 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 TCEA2Q15560 299 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 MGME1Q9BQP7 344 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 BRINP2Q9C0B6 783 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 R3HDMLQ9H3Y0 253 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 PLAC1Q9HBJ0 212 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 DUS2Q9NX74 493 aaKnown RBP14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 PAQR5Q9NXK6 330 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 PCDHGB6Q9Y5F9 930 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM172BPA6NC97 362 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 CLCA1A8K7I4 914 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 GJB3O75712 270 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 GSRP00390 522 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 SAGP10523 405 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 HMGCLP35914 325 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 MDGA1Q8NFP4 955 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC7A5P2Q9GIP4 190 aa14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZCCHC3Q9NUD5 404 aaKnown RBP14.52□□□□□ -0.09
ARHGEF40-207ENST00000556399 TBC1D3BA6NDS4 549 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 TLL1O43897 1013 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF623O75123 536 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 TCF3P15923 654 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 LIPKQ5VXJ0 399 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 DESI1Q6ICB0 168 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 PRR23CQ6ZRP0 262 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 DNAJB7Q7Z6W7 309 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 B3GNT8Q7Z7M8 397 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SARDHQ9UL12 918 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 ISM1B1AKI9 464 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 COCHO43405 550 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 ATXN1LP0C7T5 689 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 DCDC1P59894 354 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF763Q0D2J5 394 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 MAD2L1BPQ15013 274 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 TICAM1Q8IUC6 712 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 LRRC20Q8TCA0 184 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 TMED9Q9BVK6 235 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 TSSK6Q9BXA6 273 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 GRIP1Q9Y3R0 1128 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 YIPF1Q9Y548 306 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 MROH6A6NGR9 719 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 AFF1P51825 1210 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZNF140P52738 457 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SMU1Q2TAY7 513 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 LIPJQ5W064 366 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SMARCD3Q6STE5 483 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 PTRH1Q86Y79 214 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 KLHL36Q8N4N3 616 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 FAM98AQ8NCA5 519 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC9A6Q92581 669 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 GTF2H4Q92759 462 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 CNDP2Q96KP4 475 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 ZFP3Q96NJ6 502 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 OR2AG1Q9H205 316 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 HSPB11Q9Y547 144 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 NHSL1Q5SYE7 1610 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 NUAK1O60285 661 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SEC14L2O76054 403 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC6A4P31645 630 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 POLR2IP36954 125 aaKnown RBP14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SMSP52788 366 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 TXNDC8Q6A555 127 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 SLC5A8Q8N695 610 aa14.51□□□□□ -0.09
ARHGEF40-207ENST00000556399 PIP5K1AQ99755 562 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms