RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 GEMIN8Q9NWZ8 242 aaKnown RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 TCFL5Q9UL49 500 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 ZNF490Q9ULM2 529 aaPredicted RBP9.18□□□□□ -0.94
SRP54-210ENST00000556380 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
SRP54-210ENST00000556380 IGLV3-12A0A075B6K2 115 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 LRRC14BA6NHZ5 514 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 K7EPI3 171 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 ERVH48-1M5A8F1 160 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 OR1F1O43749 312 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 SUPT3HO75486 399 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 TBX6O95947 436 aaPredicted RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 STATHP02808 62 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 SMIM10L1P0DMW3 83 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 CD22P20273 847 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 GRK3P35626 688 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 SLCO1A2P46721 670 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 ALDH18A1P54886 795 aaKnown RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 FOXL2P58012 376 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 RPS15P62841 145 aaKnown RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 MC1RQ01726 317 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 CDC20Q12834 499 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 HYAL2Q12891 473 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 PWP1Q13610 501 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 DOC2AQ14183 400 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 TBCCQ15814 346 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 TBR1Q16650 682 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 PDK4Q16654 411 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 ATP1A1-AS1Q5TC04 95 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 METTL2BQ6P1Q9 378 aaKnown RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 PRMT9Q6P2P2 845 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 VN1R5Q7Z5H4 357 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 TMPRSS11BQ86T26 416 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 SYVN1Q86TM6 617 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 ASPGQ86U10 573 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 LCA5Q86VQ0 697 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 METTL27Q8N6F8 245 aaPredicted RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 KCT2Q8NC54 265 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 CAMKVQ8NCB2 501 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 NT5CQ8TCD5 201 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 ADAMTS17Q8TE56 1095 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 EPS8L3Q8TE67 593 aaKnown RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 SLC13A3Q8WWT9 602 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 FKBP10Q96AY3 582 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 MVB12AQ96EY5 273 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 SMIM10Q96HG1 83 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 C17orf62Q9BQA9 187 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 AIF1LQ9BQI0 150 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 TMEM109Q9BVC6 243 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 PITHD1Q9GZP4 211 aaPredicted RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 AICDAQ9GZX7 198 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
SRP54-210ENST00000556380 TMEM216Q9P0N5 145 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 XPR1Q9UBH6 696 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 TBK1Q9UHD2 729 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 ZFP69BQ9UJL9 534 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 SLC22A7Q9Y694 548 aa9.17□□□□□ -0.94
SRP54-210ENST00000556380 C9J4A7 227 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 STX16-NPEPL1H3BU86 382 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 GOLGA8RI6L899 631 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 E2F3O00716 465 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 STX16O14662 325 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 CCNT2O60583 730 aaKnown RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 CDH16O75309 829 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 H2AFYO75367 372 aaKnown RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 SIX3O95343 332 aaPredicted RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 S100BP04271 92 aaPredicted RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 ITGB2P05107 769 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 UMODP07911 640 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 GSTA1P08263 222 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 PRKAR1AP10644 381 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 GFAPP14136 432 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 CXCR2P25025 360 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 SLC18A2Q05940 514 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 IL10RAQ13651 578 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 ERV3-1Q14264 604 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 SLBPQ14493 270 aaKnown RBP eCLIP9.16□□□□□ -0.94
SRP54-210ENST00000556380 SLC9A5Q14940 896 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 NKG7Q16617 165 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 UGT8Q16880 541 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 LINC00303Q3SY05 128 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 MLIPQ5VWP3 458 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 C16orf46Q6P387 395 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 TMIGD1Q6UXZ0 262 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 PRSS41Q7RTY9 318 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 PDSS2Q86YH6 399 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 SHISA5Q8N114 240 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 PTGR2Q8N8N7 351 aaPredicted RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 AMER3Q8N944 861 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 SNX31Q8N9S9 440 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 OR2Y1Q8NGV0 311 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 PTCD3Q96EY7 689 aaKnown RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 SEC16BQ96JE7 1060 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 C1QTNF3Q9BXJ4 246 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 RHBGQ9H310 441 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 WDR54Q9H977 334 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 ZNF304Q9HCX3 659 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 IFT80Q9P2H3 777 aaPredicted RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 CPSF2Q9P2I0 782 aaKnown RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 CTSFQ9UBX1 484 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms