RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FNDC8Q8TC99 324 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 MAGEE2Q8TD90 523 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 BRSK1Q8TDC3 778 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RAB2BQ8WUD1 216 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SNX33Q8WV41 574 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ANKRD49Q8WVL7 239 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 LINC00476Q8WZB0 136 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TFAP2CQ92754 450 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PSMG2Q969U7 264 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 NCLNQ969V3 563 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 FAM162AQ96A26 154 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 FUBP1Q96AE4 644 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM125Q96AQ2 219 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 VPS33AQ96AX1 596 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SLCO4A1Q96BD0 722 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 MOCOSQ96EN8 888 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 LINGO1Q96FE5 620 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 UBXN10Q96LJ8 280 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 C8orf48Q96LL4 319 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PPP3R2Q96LZ3 170 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RNF145Q96MT1 663 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GPATCH1Q9BRR8 931 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SLC39A3Q9BRY0 314 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 HGH1Q9BTY7 390 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CPEB1Q9BZB8 566 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 WDR12Q9GZL7 423 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SERHL2Q9H4I8 314 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RETREG1Q9H6L5 497 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CXorf21Q9HAI6 301 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 FBRSL1Q9HCM7 1045 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PREBQ9HCU5 417 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PALMDQ9NP74 551 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SEMA4BQ9NPR2 832 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 AKIP1Q9NQ31 210 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 HPS4Q9NQG7 708 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SDR39U1Q9NRG7 319 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 AGPAT4Q9NRZ5 378 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SMOXQ9NWM0 555 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 OSER1Q9NX31 292 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 FAM30AQ9NZY2 134 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PTGFRNQ9P2B2 879 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CACNG4Q9UBN1 327 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TMPRSS11EQ9UL52 423 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 EIF3LQ9Y262 564 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RNF11Q9Y3C5 154 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PKP3Q9Y446 797 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PCDHB1Q9Y5F3 818 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 DNAJC15Q9Y5T4 150 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TNFRSF18Q9Y5U5 241 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 V9GYQ6 96 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 MYO7AQ13402 2215 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 MAST4O15021 2626 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PTPRDP23468 1912 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LOC285095A0A1B0GVY8 99 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PRSS38A1L453 326 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LCHNA4D1U4 455 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 FAM149AA5PLN7 773 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OR51F1A6NGY5 319 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NCF1BA6NI72 391 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NCF1CA8MVU1 366 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 H3BMM5 538 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 H3BSA7 217 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 I6L893 689 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 J3KR12 359 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SLC28A1O00337 649 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CCL22O00626 93 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 UBFD1O14562 309 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 STX7O15400 261 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LDB2O43679 373 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PRAMEF11O60813 436 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 DUSP11O75319 330 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 E2F6O75461 281 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ECI2O75521 394 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 DNAJB5O75953 348 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CDK14O94921 469 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SIX3O95343 332 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OTCP00480 354 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 C1RP00736 705 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ATXN1LP0C7T5 689 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OCM2P0CE71 109 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OCMP0CE72 109 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RAP2AP10114 183 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 THRBP10828 461 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CDK4P11802 303 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NCF1P14598 390 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PKMP14618 531 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CKMT2P17540 419 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 HDCP19113 662 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CHRM3P20309 590 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LPOP22079 712 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ZFP36P26651 326 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 DCKP27707 260 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 AVPR2P30518 371 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 FMO4P31512 558 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 MAGEA11P43364 429 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OR1G1P47890 313 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 HLCSP50747 726 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CCT8P50990 548 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ALDH3A2P51648 485 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms