RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TMEM205Q6UW68 189 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ARSKQ6UWY0 536 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 PAMR1Q6UXH9 720 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 GALNTL5Q7Z4T8 443 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 MAP7D3Q8IWC1 876 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 TBC1D21Q8IYX1 336 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 SLC25A41Q8N5S1 370 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 FAM98AQ8NCA5 519 aaKnown RBP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 OR5K2Q8NHB8 316 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 HEXDCQ8WVB3 486 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ZUFSPQ96AP4 578 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ANKRD10Q9NXR5 420 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 LIMA1Q9UHB6 759 aaKnown RBP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 IP6K2Q9UHH9 426 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 FAM153AQ9UHL3 310 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ADAM21Q9UKJ8 722 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 ASF1AQ9Y294 204 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 TDRKHQ9Y2W6 561 aaKnown RBP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-236ENST00000556220 MPDZO75970 2070 aa6.46□□□□□ -1.38
ATXN3-236ENST00000556220 CUBNO60494 3623 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 A0A0A6YYK5 440 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 NUDT19A8MXV4 375 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 TARM1B6A8C7 271 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 DDX3XO00571 662 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 NEURL1O76050 574 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 SUN1O94901 812 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 AP2A1O95782 977 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 TPM2P07951 284 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 GSTM1P09488 218 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 FBLP22087 321 aaKnown RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 SSR1P43307 286 aaKnown RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 KIR2DL3P43628 341 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 NUP107P57740 925 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 VSX2P58304 361 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 XIAPP98170 497 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 PPP2R2BQ00005 443 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 FASTKQ14296 549 aaKnown RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 SLC1A5Q15758 541 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 SHEQ5VZ18 495 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 FCRLBQ6BAA4 426 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 ZNF571Q7Z3V5 609 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 VSTM4Q8IW00 320 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 RPRMLQ8N4K4 120 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 HORMAD2Q8N7B1 307 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 SPC24Q8NBT2 197 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 OR4K2Q8NGD2 314 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 SLC22A18Q96BI1 424 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 ULK4Q96C45 1275 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 MRFAP1L1Q96HT8 127 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 SEC16BQ96JE7 1060 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 PWWP2AQ96N64 755 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 JMJD8Q96S16 334 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 COPS8Q99627 209 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 OLFM1Q99784 485 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 TGIF2Q9GZN2 237 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 TP63Q9H3D4 680 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 VPS37BQ9H9H4 285 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 INTS7Q9NVH2 962 aaKnown RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 C14orf105Q9NVL8 296 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 STOX2Q9P2F5 926 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-236ENST00000556220 IMPACTQ9P2X3 320 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 CRLS1Q9UJA2 301 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 GNPTGQ9UJJ9 305 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 PLAGL1Q9UM63 463 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 ZANQ9Y493 2812 aa6.45□□□□□ -1.38
ATXN3-236ENST00000556220 IGLV3-16A0A075B6K0 115 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 C2orf81A6NN90 581 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 A6NNC1 897 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 RNF212BA8MTL3 300 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 INAFM1C9JVW0 142 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 MYO1FO00160 1098 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 SHOXO15266 292 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 KDM1AO60341 852 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 CTSVO60911 334 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 PKLRP30613 574 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 SLC26A3P40879 764 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 TNNT3P45378 269 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-236ENST00000556220 OC90Q02509 493 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-236ENST00000556220 PDK1Q15118 436 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 TAZQ16635 292 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 MAPKAPK3Q16644 382 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 MUM1Q2TAK8 710 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 CT47A1Q5JQC4 288 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-236ENST00000556220 PLAG1Q6DJT9 500 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 SNX20Q7Z614 316 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 CRLF3Q8IUI8 442 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 TMTC1Q8IUR5 882 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 PLD5Q8N7P1 536 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 TC2NQ8N9U0 490 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 LINC01356Q8N9X3 169 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 LINC01555Q8NAE3 123 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 TEKT5Q96M29 485 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 RNF157Q96PX1 679 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 NPAS2Q99743 824 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 TM9SF2Q99805 663 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 ISCUQ9H1K1 167 aa6.44□□□□□ -1.38
ATXN3-236ENST00000556220 FAM96AQ9H5X1 160 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms