RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 ZNHIT1O43257 154 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 DNAJB6O75190 326 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 CLDN14O95500 239 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 CDH1P12830 882 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 EEF1DP29692 281 aaKnown RBP12.46□□□□□ -0.41
TUBB3-208ENST00000555576 VPS41P49754 854 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 CASP6P55212 293 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 ALDH6A1Q02252 535 aaKnown RBP12.46□□□□□ -0.41
TUBB3-208ENST00000555576 GPS1Q13098 491 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 NSDHLQ15738 373 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 CASC4Q6P4E1 433 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 ZNF662Q6ZS27 426 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 GALNTL5Q7Z4T8 443 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 KIF2BQ8N4N8 673 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 SLC5A8Q8N695 610 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 TMEM178AQ8NBL3 297 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 ZNF740Q8NDX6 193 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 MCOLN3Q8TDD5 553 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 MTFMTQ96DP5 389 aaKnown RBP12.46□□□□□ -0.41
TUBB3-208ENST00000555576 PEX11GQ96HA9 241 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 DMRTA2Q96SC8 542 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 PCBD2Q9H0N5 130 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 TRIM45Q9H8W5 580 aaPredicted RBP12.46□□□□□ -0.41
TUBB3-208ENST00000555576 ANKHQ9HCJ1 492 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 NPIPA1Q9UND3 350 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 ASB1Q9Y576 335 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 COMMD10Q9Y6G5 202 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 VPS13CQ709C8 3753 aa12.46□□□□□ -0.41
TUBB3-208ENST00000555576 MAGEB16A2A368 324 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 SDR42E2A6NKP2 422 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 CDK2AP1O14519 115 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 NME2P1O60361 137 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 HAUS5O94927 633 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 TSPAN12O95859 305 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 SP1P08047 785 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 CD46P15529 392 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 IL10P22301 178 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 NME2P22392 152 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 CXCR5P32302 372 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 SMSP52788 366 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 HSF1Q00613 529 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 SP140Q13342 867 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 PHKG1Q16816 387 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 CAPN13Q6MZZ7 669 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-208ENST00000555576 AGTRAPQ6RW13 159 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 LCTLQ6UWM7 567 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-208ENST00000555576 C17orf64Q86WR6 236 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 ARMC10Q8N2F6 343 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 MFSD9Q8NBP5 474 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 SPC24Q8NBT2 197 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 MCUQ8NE86 351 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 ABHD11Q8NFV4 315 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 OR4K1Q8NGD4 311 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 PHF10Q8WUB8 498 aaKnown RBP12.45□□□□□ -0.42
TUBB3-208ENST00000555576 MAIP1Q8WWC4 291 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 SLC13A3Q8WWT9 602 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 C14orf79Q96F83 325 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 LPAR4Q99677 370 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 FAM129AQ9BZQ8 928 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 ATG10Q9H0Y0 220 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 CCDC68Q9H2F9 335 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 SAMD15Q9P1V8 674 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 FBXO5Q9UKT4 447 aa12.45□□□□□ -0.42
TUBB3-208ENST00000555576 MED13LQ71F56 2210 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 ASNA1O43681 348 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 GALR3O60755 368 aaPredicted RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SLC25A12O75746 678 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 MLYCDO95822 493 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 C8GP07360 202 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 FHP07954 510 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SLC35G6P0C7Q6 338 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 ESRRAP11474 423 aaPredicted RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 NPPBP16860 134 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 CCND1P24385 295 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 GABRB3P28472 473 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 TPP2P29144 1249 aaPredicted RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SSTR2P30874 369 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SARNPP82979 210 aaKnown RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 THOC5Q13769 683 aaKnown RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 HERC3Q15034 1050 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SLC25A25Q6KCM7 469 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 LRRC8EQ6NSJ5 796 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 DOLPP1Q86YN1 238 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 GHDCQ8N2G8 530 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 CPSF7Q8N684 471 aaKnown RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 AGAP11Q8TF27 550 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 EEF1AKMT1Q8WVE0 214 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SIGLEC10Q96LC7 697 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 OR4K3Q96R72 315 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 NDNQ99608 321 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 OLFM1Q99784 485 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SPOCK3Q9BQ16 436 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 ENKD1Q9H0I2 346 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 SPNS1Q9H2V7 528 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 PARVBQ9HBI1 364 aa12.44□□□□□ -0.42
TUBB3-208ENST00000555576 XAB2Q9HCS7 855 aaKnown RBP12.44□□□□□ -0.42
TUBB3-208ENST00000555576 HOMER3Q9NSC5 361 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms