RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 SGPP1Q9BX95 441 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 VN1R1Q9GZP7 353 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 PCBD2Q9H0N5 130 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 KCNF1Q9H3M0 494 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 TRMT1Q9NXH9 659 aaKnown RBP10.21□□□□□ -0.77
TDP1-212ENST00000555565 ZNF835Q9Y2P0 537 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 TRAV17A0A0B4J275 112 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 FEZF1A0PJY2 475 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 DYTNA2CJ06 578 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 FAM221AA4D161 298 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 OR2W5A6NFC9 320 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 SLC16A5O15375 505 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 ZSCAN12O43309 604 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 LCMT2O60294 686 aaKnown RBP10.2□□□□□ -0.78
TDP1-212ENST00000555565 C8orf89P0DMQ9 161 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 ITGAMP11215 1152 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 CDH1P12830 882 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 NPPBP16860 134 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 IL1RNP18510 177 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 BCL6P41182 706 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 PRRC2AP48634 2157 aaKnown RBP10.2□□□□□ -0.78
TDP1-212ENST00000555565 ART1P52961 327 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 ARG2P78540 354 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 CACNA1CQ13936 2221 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 HP1BP3Q5SSJ5 553 aaPredicted RBP10.2□□□□□ -0.78
TDP1-212ENST00000555565 TEDDM1Q5T9Z0 273 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 TRMT10BQ6PF06 316 aaKnown RBP10.2□□□□□ -0.78
TDP1-212ENST00000555565 LCTLQ6UWM7 567 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 LANCL3Q6ZV70 420 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 PCGF5Q86SE9 256 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 GALNT7Q86SF2 657 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 SLC26A11Q86WA9 606 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 C17orf64Q86WR6 236 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 PALM2Q8IXS6 379 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 MYO1HQ8N1T3 1032 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 KCT2Q8NC54 265 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 OR51Q1Q8NH59 317 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 DNAJB8Q8NHS0 232 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 GABPB2Q8TAK5 448 aaPredicted RBP10.2□□□□□ -0.78
TDP1-212ENST00000555565 ALKBH8Q96BT7 664 aaKnown RBP10.2□□□□□ -0.78
TDP1-212ENST00000555565 THAP11Q96EK4 314 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 PWWP2AQ96N64 755 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 CYTH2Q99418 400 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 WDR83Q9BRX9 315 aaKnown RBP10.2□□□□□ -0.78
TDP1-212ENST00000555565 HCN3Q9P1Z3 774 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 TNFRSF10DQ9UBN6 386 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 TINAGQ9UJW2 476 aa10.2□□□□□ -0.78
TDP1-212ENST00000555565 IGHV3-20A0A0C4DH32 117 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 SGK494L7N484 410 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 FAM155BO75949 473 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 WFS1O76024 890 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 F10P00742 488 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 ICAM2P13598 275 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 TCP1P17987 556 aaKnown RBP10.19□□□□□ -0.78
TDP1-212ENST00000555565 CCND1P24385 295 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 ELK3P41970 407 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 XCR1P46094 333 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 SMSP52788 366 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 IL2P60568 153 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 MINDY4Q4G0A6 757 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 HECTD2Q5U5R9 776 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 CAPN13Q6MZZ7 669 aaPredicted RBP10.19□□□□□ -0.78
TDP1-212ENST00000555565 Q6ZPB1 254 aaPredicted RBP10.19□□□□□ -0.78
TDP1-212ENST00000555565 NCCRP1Q6ZVX7 275 aaPredicted RBP10.19□□□□□ -0.78
TDP1-212ENST00000555565 ASPGQ86U10 573 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 PDSS2Q86YH6 399 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 CAMKVQ8NCB2 501 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 ABHD11Q8NFV4 315 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 OR56A3Q8NH54 315 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 ZCCHC10Q8TBK6 192 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 CHTF18Q8WVB6 975 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 SLC13A3Q8WWT9 602 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 PYCR2Q96C36 320 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 TUBB6Q9BUF5 446 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 CXXC4Q9H2H0 198 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 PPANQ9NQ55 473 aaKnown RBP10.19□□□□□ -0.78
TDP1-212ENST00000555565 ARL15Q9NXU5 204 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 CHMP2BQ9UQN3 213 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 MEMO1Q9Y316 297 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 TEX264Q9Y6I9 313 aa10.19□□□□□ -0.78
TDP1-212ENST00000555565 VPS13CQ709C8 3753 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 MAP1AP78559 2803 aaPredicted RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 USP27XA6NNY8 438 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 TP73O15350 636 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 RDH16O75452 317 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 SEC24DO94855 1032 aaPredicted RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 RASAL1O95294 804 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 WDPCPO95876 746 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 CRYABP02511 175 aaKnown RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 UQCRHP07919 91 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 CYC1P08574 325 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 HIST1H2AGP0C0S8 130 aaPredicted RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 IGFBP2P18065 325 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 HIST1H2ADP20671 130 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 AP1S2P56377 157 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 MEF2AQ02078 507 aaPredicted RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
TDP1-212ENST00000555565 MORF4L2Q15014 288 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 MFSD4BQ5TF39 518 aa10.18□□□□□ -0.78
TDP1-212ENST00000555565 STEAP4Q687X5 459 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms