RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	SEC22B	O75396	215 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	GRAP2	O75791	330 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	NADK	O95544	446 aa	Predicted RBP	3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	CLPTM1	O96005	669 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	PRSS1	P07477	247 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	CPA3	P15088	417 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	SRD5A2	P31213	254 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	SMS	P52788	366 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	DLX5	P56178	289 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	GFPT1	Q06210	699 aa	Predicted RBP	3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	PDE7A	Q13946	482 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	OR4C11	Q6IEV9	310 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC24A5	Q71RS6	500 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	GPC2	Q8N158	579 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	FAM89B	Q8N5H3	189 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	TMEM99	Q8N816	258 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	OR1L3	Q8NH93	324 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	DYRK2	Q92630	601 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	GGH	Q92820	318 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	FAM46B	Q96A09	425 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	RFT1	Q96AA3	541 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	GIMAP5	Q96F15	307 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	LMLN	Q96KR4	655 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	LPAR4	Q99677	370 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	PIGQ	Q9BRB3	760 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	PANK4	Q9NVE7	773 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	TBC1D13	Q9NVG8	400 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF624	Q9P2J8	865 aa	Predicted RBP	3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	TRMT6	Q9UJA5	497 aa	Known RBP	3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	FBXL4	Q9UKA2	621 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	PILRB	Q9UKJ0	227 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	NCKAP1	Q9Y2A7	1128 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	TMED7	Q9Y3B3	224 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	COLEC10	Q9Y6Z7	277 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506	ARID2	Q68CP9	1835 aa		3.89	□□□□□ -1.79
KTN1-222	ENST00000555506		A0A0G2JLW4	131 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	MTMR11	A4FU01	709 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	PRDM1	O75626	825 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	PAK4	O96013	591 aa	Predicted RBP	3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	ABHD2	P08910	425 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	FAM157C	P0CG43	387 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	ERVK-10	P10266	1014 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	GAP43	P17677	238 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	NR0B1	P51843	470 aa	Known RBP	3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	LBX1	P52954	281 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	CASP9	P55211	416 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	RPL36A	P83881	106 aa	Known RBP	3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	LCP2	Q13094	533 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	ARHGEF16	Q5VV41	709 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	CEACAM20	Q6UY09	585 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	SH2D5	Q6ZV89	423 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	FCRLA	Q7L513	359 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	GET4	Q7L5D6	327 aa	Predicted RBP	3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	NIPA2	Q8N8Q9	360 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	SMYD1	Q8NB12	490 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	OR2T11	Q8NH01	316 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	APOBEC4	Q8WW27	367 aa	Known RBP	3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF524	Q96C55	264 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	NXPE2	Q96DL1	559 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	C10orf90	Q96M02	699 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	RUFY1	Q96T51	708 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	NAP1L3	Q99457	506 aa	Predicted RBP	3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	ABCG8	Q9H221	673 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	ZDHHC6	Q9H6R6	413 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	EGLN3	Q9H6Z9	239 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	TMOD3	Q9NYL9	352 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	ELF5	Q9UKW6	265 aa	Predicted RBP	3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	KCNK6	Q9Y257	313 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	PPP2R2C	Q9Y2T4	447 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	SMCHD1	A6NHR9	2005 aa		3.88	□□□□□ -1.79
KTN1-222	ENST00000555506	MYH14	Q7Z406	1995 aa	Known RBP	3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	TRBV2	A0A0J9YWF9	115 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	PRSS44	E7EML9	344 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	TEX28	O15482	410 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	KIF5C	O60282	957 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	LMX1B	O60663	402 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	CLN5	O75503	358 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	CLK1	P49759	484 aa	Known RBP	3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	LUM	P51884	338 aa	Predicted RBP	3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	OR1D5	P58170	312 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	KCNJ10	P78508	379 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	PHEX	P78562	749 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	IL1RL1	Q01638	556 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	WASHC5	Q12768	1159 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	SGCG	Q13326	291 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	PTPN14	Q15678	1187 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	CCDC6	Q16204	474 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	GTDC1	Q4AE62	458 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	FAM76B	Q5HYJ3	339 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	FGD3	Q5JSP0	725 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC25A47	Q6Q0C1	308 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	DHRS11	Q6UWP2	260 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	LEKR1	Q6ZMV7	388 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	C18orf65	Q6ZTR6	163 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	TRMT1L	Q7Z2T5	733 aa	Known RBP	3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	THEM5	Q8N1Q8	247 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	NEK11	Q8NG66	645 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	OR10V1	Q8NGI7	309 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	URGCP	Q8TCY9	931 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC13A3	Q8WWT9	602 aa		3.87	□□□□□ -1.79

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