RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ZNF852Q6ZMS4 543 aa23.31■■□□□ 1.32
TMEM260-207ENST00000555497 CHST15Q7LFX5 561 aaPredicted RBP23.31■■□□□ 1.32
TMEM260-207ENST00000555497 METTL4Q8N3J2 472 aa23.31■■□□□ 1.32
TMEM260-207ENST00000555497 HDDC3Q8N4P3 179 aa23.31■■□□□ 1.32
TMEM260-207ENST00000555497 OXR1Q8N573 874 aa23.31■■□□□ 1.32
TMEM260-207ENST00000555497 OR4A15Q8NGL6 344 aa23.31■■□□□ 1.32
TMEM260-207ENST00000555497 MCOLN1Q9GZU1 580 aa23.31■■□□□ 1.32
TMEM260-207ENST00000555497 PTTG2Q9NZH5 202 aa23.31■■□□□ 1.32
TMEM260-207ENST00000555497 ZFR2Q9UPR6 939 aaKnown RBP23.31■■□□□ 1.32
TMEM260-207ENST00000555497 RNASET2O00584 256 aaKnown RBP23.3■■□□□ 1.32
TMEM260-207ENST00000555497 B4GAT1O43505 415 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 E2F6O75461 281 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 APODP05090 189 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 KLK1P06870 262 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 SLC5A2P31639 672 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 EIF2DP41214 584 aaKnown RBP23.3■■□□□ 1.32
TMEM260-207ENST00000555497 RGNQ15493 299 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.3■■□□□ 1.32
TMEM260-207ENST00000555497 CCNYL2Q5T2Q4 361 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 VPS37AQ8NEZ2 397 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 MAL2Q969L2 176 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 CIDECQ96AQ7 238 aaPredicted RBP23.3■■□□□ 1.32
TMEM260-207ENST00000555497 MPP4Q96JB8 637 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 RBM4BQ9BQ04 359 aaKnown RBP23.3■■□□□ 1.32
TMEM260-207ENST00000555497 RBM4Q9BWF3 364 aaKnown RBP23.3■■□□□ 1.32
TMEM260-207ENST00000555497 IL1RAPQ9NPH3 570 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 TMEFF2Q9UIK5 374 aaPredicted RBP23.3■■□□□ 1.32
TMEM260-207ENST00000555497 PLXND1Q9Y4D7 1925 aa23.3■■□□□ 1.32
TMEM260-207ENST00000555497 CEP290O15078 2479 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 TBX6O95947 436 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 FURINP09958 794 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 ERGP11308 486 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 PCSK6P29122 969 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 PIK3CBP42338 1070 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 CASP9P55211 416 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 HBA1P69905 142 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 CAMK2GQ13555 558 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 C10orf62Q5T681 223 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 DUS1LQ6P1R4 473 aaKnown RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 TMIGD1Q6UXZ0 262 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 NAGSQ8N159 534 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 OR5K2Q8NHB8 316 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 EZH1Q92800 747 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 MENTQ9BUN1 341 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 TEX101Q9BY14 249 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 BHLHE41Q9C0J9 482 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 GPATCH2Q9NW75 528 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 MAPRE3Q9UPY8 281 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 DIRAS1O95057 198 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 PAK4O96013 591 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 SEC13P55735 322 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 TAS2R50P59544 299 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 VLDLRP98155 873 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 C2orf80Q0P641 193 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 KCNAB2Q13303 367 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 LAPTM4AQ15012 233 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 IRF4Q15306 451 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 FAM71E1Q6IPT2 247 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 CEP68Q76N32 757 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 MMP21Q8N119 569 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 ZNF513Q8N8E2 541 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 POP5Q969H6 163 aaKnown RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 RDH12Q96NR8 316 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 LMAN2LQ9H0V9 348 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 IFT80Q9P2H3 777 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-207ENST00000555497 TAC3Q9UHF0 121 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 VPS4AQ9UN37 437 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 GMEB1Q9Y692 573 aa23.29■■□□□ 1.32
TMEM260-207ENST00000555497 SZT2Q5T011 3432 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 hCG_2039718K7EN88 272 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 HS6ST1O60243 411 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 MVDP53602 400 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 PDE7AQ13946 482 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 COX20Q5RI15 118 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 CBLL1Q75N03 491 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 CXorf40BQ96DE9 158 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 CDCA3Q99618 268 aaPredicted RBP23.28■■□□□ 1.32
TMEM260-207ENST00000555497 NPLQ9BXD5 320 aaPredicted RBP23.28■■□□□ 1.32
TMEM260-207ENST00000555497 CUEDC1Q9NWM3 386 aaPredicted RBP23.28■■□□□ 1.32
TMEM260-207ENST00000555497 C6orf47O95873 294 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 PSMB5P28074 263 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 POLR2IP36954 125 aaKnown RBP23.28■■□□□ 1.32
TMEM260-207ENST00000555497 RPS6KA3P51812 740 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 EIF3MQ7L2H7 374 aaKnown RBP23.28■■□□□ 1.32
TMEM260-207ENST00000555497 HSH2DQ96JZ2 352 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 MYNNQ9NPC7 610 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 THEGQ9P2T0 379 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 WDR37Q9Y2I8 494 aa23.28■■□□□ 1.32
TMEM260-207ENST00000555497 GCM2O75603 506 aaPredicted RBP23.27■■□□□ 1.32
TMEM260-207ENST00000555497 HYAL1Q12794 435 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 VEZF1Q14119 521 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 ITPRIPL2Q3MIP1 535 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 PPP2R2DQ66LE6 453 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 KIAA1211LQ6NV74 962 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 ANKRD54Q6NXT1 300 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 DCP2Q8IU60 420 aaKnown RBP23.27■■□□□ 1.32
TMEM260-207ENST00000555497 GOT1L1Q8NHS2 421 aaPredicted RBP23.27■■□□□ 1.32
TMEM260-207ENST00000555497 YTHDF1Q9BYJ9 559 aaKnown RBP23.27■■□□□ 1.32
TMEM260-207ENST00000555497 RPS6KA6Q9UK32 745 aa23.27■■□□□ 1.32
TMEM260-207ENST00000555497 TSC22D4Q9Y3Q8 395 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms