RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SPENQ96T58 3664 aaKnown RBP12.94□□□□□ -0.34
SNX6-203ENST00000555416 TENM4Q6N022 2769 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 SUPT3HB4E1H0 165 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 POC1B-GALNT4F8VUJ3 575 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 KERAO60938 352 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 SUPT3HO75486 399 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 STK16O75716 305 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 BMP10O95393 424 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 TBX6O95947 436 aaPredicted RBP12.94□□□□□ -0.34
SNX6-203ENST00000555416 SLC35G6P0C7Q6 338 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 ZNF888P0CJ79 500 aaPredicted RBP12.94□□□□□ -0.34
SNX6-203ENST00000555416 HNF4AP41235 474 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 MAGEA12P43365 314 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 CD97P48960 835 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 PGDP52209 483 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 RRADP55042 308 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 OLR1P78380 273 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 CDC16Q13042 620 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 SLBPQ14493 270 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX6-203ENST00000555416 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
SNX6-203ENST00000555416 NADK2Q4G0N4 442 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 CEP128Q6ZU80 1094 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 VN1R5Q7Z5H4 357 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 IFT20Q8IY31 132 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 SNX31Q8N9S9 440 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 STAG3L4Q8TBR4 150 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 NT5CQ8TCD5 201 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 AIF1LQ9BQI0 150 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 RBCK1Q9BYM8 510 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 TGIF2Q9GZN2 237 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 SLC6A16Q9GZN6 736 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 TSPYL1Q9H0U9 437 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 EPN3Q9H201 632 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 ZBTB20Q9HC78 741 aaPredicted RBP12.94□□□□□ -0.34
SNX6-203ENST00000555416 MKKSQ9NPJ1 570 aaPredicted RBP12.94□□□□□ -0.34
SNX6-203ENST00000555416 DNAJC11Q9NVH1 559 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 HEMK1Q9Y5R4 338 aaPredicted RBP12.94□□□□□ -0.34
SNX6-203ENST00000555416 SLC22A7Q9Y694 548 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 DOCK10Q96BY6 2186 aa12.94□□□□□ -0.34
SNX6-203ENST00000555416 A0A087X1B8 175 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 H0YIG0 161 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 CCNT2O60583 730 aaKnown RBP12.93□□□□□ -0.34
SNX6-203ENST00000555416 GALR3O60755 368 aaPredicted RBP12.93□□□□□ -0.34
SNX6-203ENST00000555416 INHBAP08476 426 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 GNAZP19086 355 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 TYK2P29597 1187 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 AHRP35869 848 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 AVPR1BP47901 424 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 SERPINB8P50452 374 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 EMP2P54851 167 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 RAB8AP61006 207 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 PWP1Q13610 501 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 DOC2AQ14183 400 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 DEFB134Q4QY38 66 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 PARP9Q8IXQ6 854 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 TCAIMQ8N3R3 496 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 GALNT16Q8N428 558 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 CLEC1AQ8NC01 280 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 OR51Q1Q8NH59 317 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 UTP15Q8TED0 518 aaKnown RBP12.93□□□□□ -0.34
SNX6-203ENST00000555416 ISL2Q96A47 359 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 FER1L6-AS2Q96M78 137 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 SMAD5Q99717 465 aaKnown RBP12.93□□□□□ -0.34
SNX6-203ENST00000555416 CD244Q9BZW8 370 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 VN1R1Q9GZP7 353 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 VPS11Q9H270 941 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 ZNF552Q9H707 407 aaPredicted RBP12.93□□□□□ -0.34
SNX6-203ENST00000555416 ANKHQ9HCJ1 492 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 C14orf105Q9NVL8 296 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 GPR83Q9NYM4 423 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 NUDT4Q9NZJ9 180 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 MKL2Q9ULH7 1088 aa12.93□□□□□ -0.34
SNX6-203ENST00000555416 ZNF490Q9ULM2 529 aaPredicted RBP12.93□□□□□ -0.34
SNX6-203ENST00000555416 A0A087WUV0 522 aaPredicted RBP12.92□□□□□ -0.34
SNX6-203ENST00000555416 TRIM49D1C9J1S8 452 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 J3QKU1 62 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 MAP2K7O14733 419 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 PRPF4O43172 522 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNX6-203ENST00000555416 RIPK2O43353 540 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 KLHL2O95198 593 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 HEXBP07686 556 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 CELA2AP08217 269 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 SMIM10L1P0DMW3 83 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 COX6A1P12074 109 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 ACPPP15309 386 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 ALOX12P18054 663 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 HNRNPH1P31943 449 aaKnown RBP12.92□□□□□ -0.34
SNX6-203ENST00000555416 MSH2P43246 934 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 XCR1P46094 333 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 SOX8P57073 446 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 EEF1A2Q05639 463 aaKnown RBP12.92□□□□□ -0.34
SNX6-203ENST00000555416 MYBPC3Q14896 1274 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 PDK4Q16654 411 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 TUBB8Q3ZCM7 444 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 TECRLQ5HYJ1 363 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 TOR1AIP1Q5JTV8 583 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 TEX35Q5T0J7 233 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 TMIGD1Q6UXZ0 262 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 ATG14Q6ZNE5 492 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 LANCL3Q6ZV70 420 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms