RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 LAPTM5Q13571 262 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 HIST2H2ACQ16777 129 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ST3GAL2Q16842 350 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 SPRED3Q2MJR0 410 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 XKR6Q5GH73 641 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 CATSPEREQ5SY80 951 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 YOD1Q5VVQ6 348 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ATG9BQ674R7 924 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 CLEC6AQ6EIG7 209 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 HIST2H2AA3Q6FI13 130 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 PWWP2BQ6NUJ5 590 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 LETMD1Q6P1Q0 360 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 MTDHQ86UE4 582 aaKnown RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 MYLK4Q86YV6 388 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ESX1Q8N693 406 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 CSNK1A1LQ8N752 337 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 TTLQ8NG68 377 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 STON2Q8WXE9 905 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ZCCHC14Q8WYQ9 949 aaKnown RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 UBE2E3Q969T4 207 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 PMEPA1Q969W9 287 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ATP6V1E2Q96A05 226 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 CLIP3Q96DZ5 547 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 PTCD3Q96EY7 689 aaKnown RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 MAGEB10Q96LZ2 347 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 CDK15Q96Q40 435 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF382Q96SR6 550 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 SIKE1Q9BRV8 207 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 NDC1Q9BTX1 674 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 NTMT1Q9BV86 223 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 IPPKQ9H8X2 491 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ACTR8Q9H981 624 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ACTR5Q9H9F9 607 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 EML4Q9HC35 981 aaKnown RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 TXLNGQ9NUQ3 528 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 VTI1BQ9UEU0 232 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 PILRAQ9UKJ1 303 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 STK38LQ9Y2H1 464 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 TIMM22Q9Y584 194 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 PCDHB3Q9Y5E6 796 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ACACBO00763 2458 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ADAMTS20P59510 1910 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 KCNE1BA0A087WTH5 132 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-218ENST00000555213 SLCO1B7G3V0H7 640 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 H0YGG7 62 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 EBAG9O00559 213 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 AZIN1O14977 448 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 OR1F1O43749 312 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 NRP2O60462 931 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 WFS1O76024 890 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 MLYCDO95822 493 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 KLK3P07288 261 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-218ENST00000555213 CCNYL3P0C7X3 344 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 T-ENOLP0DO92 83 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 LIPCP11150 499 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 CD1EP15812 388 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 SERPINB1P30740 379 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 GABRA4P48169 554 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 HK2P52789 917 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 ARSFP54793 590 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 ARF3P61204 181 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-218ENST00000555213 RGS1Q08116 209 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 CHIT1Q13231 466 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 E2F2Q14209 437 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 MAP7Q14244 749 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 SLBPQ14493 270 aaKnown RBP eCLIP10.41□□□□□ -0.74
SHMT2-218ENST00000555213 TBCCQ15814 346 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 FAM214AQ32MH5 1076 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 SLCO4C1Q6ZQN7 724 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 ASPGQ86U10 573 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 NLGN4XQ8N0W4 816 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 MFSD9Q8NBP5 474 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 CAMKVQ8NCB2 501 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF248Q8NDW4 579 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 NLGN4YQ8NFZ3 816 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-218ENST00000555213 OR4F6Q8NGB9 312 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 OR4K1Q8NGD4 311 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 SNIP1Q8TAD8 396 aaKnown RBP10.41□□□□□ -0.74
SHMT2-218ENST00000555213 PROKR1Q8TCW9 393 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 KCNE4Q8WWG9 221 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 REPS1Q96D71 796 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 OR2A5Q96R48 311 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 NUF2Q9BZD4 464 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 MEAF6Q9HAF1 191 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 RNF11Q9Y3C5 154 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 PCDHGA4Q9Y5G9 962 aa10.41□□□□□ -0.74
SHMT2-218ENST00000555213 TPRP12270 2363 aaKnown RBP10.41□□□□□ -0.74
SHMT2-218ENST00000555213 FEZF1A0PJY2 475 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 FITM1A5D6W6 292 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 ERICH4A6NGS2 130 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 C1QTNF9BB2RNN3 333 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 RRP8O43159 456 aaKnown RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 NDUFS4O43181 175 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF749O43361 778 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 RAD1O60671 282 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 UGDHO60701 494 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 OTCP00480 354 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 C1QTNF9P0C862 333 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 AGXTP21549 392 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms