RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 KLC3Q6P597 504 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 BORAQ6PGQ7 559 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 PPP1R32Q7Z5V6 425 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 RNF175Q8N4F7 328 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 AFAP1L2Q8N4X5 818 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 CAMKVQ8NCB2 501 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 OR2Y1Q8NGV0 311 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 NT5CQ8TCD5 201 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 STT3BQ8TCJ2 826 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 CAVIN3Q969G5 261 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 FKBP10Q96AY3 582 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 WDR34Q96EX3 536 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 DRC3Q9H069 523 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 SLC26A1Q9H2B4 701 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 GPRC5BQ9NZH0 403 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 HCN3Q9P1Z3 774 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 OPTCQ9UBM4 332 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 RAB21Q9UL25 225 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 EMCNQ9ULC0 261 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 KCNMB2Q9Y691 235 aa11.72□□□□□ -0.53
SYNE2-214ENST00000554928 BSNQ9UPA5 3926 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 IGLV3-12A0A075B6K2 115 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 A0A0G2JN53 185 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 A0A1B0GTL3 188 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 A8MT66 165 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 K7EM74 188 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 E2F3O00716 465 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 PPP6CO00743 305 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 CLGNO14967 610 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 WFS1O76024 890 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 KLHL18O94889 574 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 ITGB2P05107 769 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 RBP1P09455 135 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 ZGLP1P0C6A0 271 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 ZNF888P0CJ79 500 aaPredicted RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 COL6A2P12110 1019 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 EEF1DP29692 281 aaKnown RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 HNRNPH1P31943 449 aaKnown RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 AHRP35869 848 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 FOLR3P41439 243 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 ALDH18A1P54886 795 aaKnown RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 POLE2P56282 527 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 RAB8AP61006 207 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 IRF8Q02556 426 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 DSG2Q14126 1118 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 FAM53BQ14153 422 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 E2F2Q14209 437 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 PCBP2Q15366 365 aaKnown RBP eCLIP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 TSNAXIP1Q2TAA8 658 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 TOR1AIP1Q5JTV8 583 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 LGSNQ5TDP6 509 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 PRMT9Q6P2P2 845 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 EMBQ6PCB8 327 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 TMIGD1Q6UXZ0 262 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 GOLGA7Q7Z5G4 137 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 MRGPREQ86SM8 312 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 TDRPQ86YL5 185 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 ZC3H7AQ8IWR0 971 aaKnown RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 UTP15Q8TED0 518 aaKnown RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 MRPL57Q9BQC6 102 aaKnown RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 CCDC77Q9BR77 488 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 YIPF2Q9BWQ6 316 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 RBCK1Q9BYM8 510 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 MRPL46Q9H2W6 279 aaKnown RBP11.71□□□□□ -0.53
SYNE2-214ENST00000554928 ZBTB26Q9HCK0 441 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 COPG2Q9UBF2 871 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 TRPC4Q9UBN4 977 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 POLHQ9Y253 713 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 MAN2B2Q9Y2E5 1009 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 NAALAD2Q9Y3Q0 740 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 HS3ST3B1Q9Y662 390 aa11.71□□□□□ -0.53
SYNE2-214ENST00000554928 FAM208BQ5VWN6 2430 aa11.71□□□□□ -0.54
SYNE2-214ENST00000554928 CCDC88CQ9P219 2028 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 TLDC2A0PJX2 215 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 TXNDC9O14530 226 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 SOCS6O14544 535 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 OR7A17O14581 309 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 DLX3O60479 287 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 H2AFYO75367 372 aaKnown RBP11.7□□□□□ -0.54
SYNE2-214ENST00000554928 SH3BGRLO75368 114 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 C1QL1O75973 258 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 NSA2O95478 260 aaKnown RBP11.7□□□□□ -0.54
SYNE2-214ENST00000554928 RECKO95980 971 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 ALBP02768 609 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 NUDT17P0C025 328 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 SLC35G6P0C7Q6 338 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 SMIM10L1P0DMW3 83 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 TSPAN8P19075 237 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 NR1D1P20393 614 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 PIK3CGP48736 1102 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 KLC1Q07866 573 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 PWP1Q13610 501 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 GTF2H2Q13888 395 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 NDUFA9Q16795 377 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 DEFB134Q4QY38 66 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 GTF2H2CQ6P1K8 395 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 C4orf33Q8N1A6 199 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 OR52B6Q8NGF0 335 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms