RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 OR5K4A6NMS3 321 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 AGAP14A8MT82 685 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 B4E171 279 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 K7ENP7 123 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 KMOO15229 486 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 LDB2O43679 373 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A9O60656 530 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF189O75820 626 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SRP72O76094 671 aaKnown RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CDK14O94921 469 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 AP2A1O95782 977 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 C9P02748 559 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ANKRD34CP0C6C1 535 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 LIPCP11150 499 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 FGF3P11487 239 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SLC2A4P14672 509 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 XRCC1P18887 633 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A6P19224 532 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 WT1P19544 449 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 DRD4P21917 467 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A1P22309 533 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A4P22310 534 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 PSMA3P25788 255 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CD82P27701 267 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A3P35503 534 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CETN2P41208 172 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TSPAN7P41732 249 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 PRLHRP49683 370 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 GFERP55789 205 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TMPRSS3P57727 454 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 GSDMDP57764 484 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 NKX6-1P78426 367 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CCZ1BP86790 482 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CCZ1P86791 482 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SRSF4Q08170 494 aaKnown RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM115Q12893 351 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 BIRC2Q13490 618 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ITGA9Q13797 1035 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 GTF2H3Q13889 308 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SPARCL1Q14515 664 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 PRPSAP1Q14558 356 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CLCA4Q14CN2 919 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SIX1Q15475 284 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TGIF1Q15583 401 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 OASLQ15646 514 aaKnown RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 INSCQ1MX18 579 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 P3H1Q32P28 736 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF658BQ4V348 819 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 BCL7AQ4VC05 210 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 LDLRAP1Q5SW96 308 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SEL1L2Q5TEA6 688 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC70Q6NSX1 233 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 INO80CQ6PI98 192 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM220Q6QAJ8 160 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 WASH2PQ6VEQ5 465 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 FAM83HQ6ZRV2 1179 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM26Q6ZUK4 368 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ARHGAP22Q7Z5H3 698 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SLC9B2Q86UD5 537 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 PIM3Q86V86 326 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ZFAND4Q86XD8 727 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SLC13A5Q86YT5 568 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TRAPPC5Q8IUR0 188 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TXLNBQ8N3L3 684 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 RNF10Q8N5U6 811 aaKnown RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 BMPERQ8N8U9 685 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 RASGEF1AQ8N9B8 481 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 FAM71DQ8N9W8 422 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 AVL9Q8NBF6 648 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 OR4K2Q8NGD2 314 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 OR13C4Q8NGS5 318 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 OR10G6Q8NH81 332 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 BRSK1Q8TDC3 778 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 NAT14Q8WUY8 206 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ATG4AQ8WYN0 398 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 RSC1A1Q92681 617 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SH3KBP1Q96B97 665 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 DNAJC1Q96KC8 554 aaKnown RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 RMDN2Q96LZ7 410 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 PPP1R2P1Q96PQ5 205 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TIMP4Q99727 224 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 CMKLR1Q99788 373 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 C19orf43Q9BQ61 176 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TBL1YQ9BQ87 522 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 FERMT1Q9BQL6 677 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ALG8Q9BVK2 526 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 DDA1Q9BW61 102 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 TSGA10Q9BZW7 698 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 B3GNT4Q9C0J1 378 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 OSGEPL1Q9H4B0 414 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 STN1Q9H668 368 aaKnown RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A7Q9HAW7 530 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A10Q9HAW8 530 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 UGT1A8Q9HAW9 530 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 ARNT2Q9HBZ2 717 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 WASH6PQ9NQA3 447 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 POT1Q9NUX5 634 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 OCIAD1Q9NX40 245 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 DNAJC16Q9Y2G8 782 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 WDR37Q9Y2I8 494 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms