RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CD84Q9UIB8 345 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 MAN1B1Q9UKM7 699 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 FZD10Q9ULW2 581 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 PCYT1BQ9Y5K3 369 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 F8P00451 2351 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 IGHV5-51A0A0C4DH38 117 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 FAM170AA1A519 330 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 RGSL1A5PLK6 1076 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 GOLGA6L4A6NEF3 574 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SIGLEC16A6NMB1 481 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 EIF3CLB5ME19 914 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 GPR89AB7ZAQ6 455 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 DFFAO00273 331 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 EEF2KO00418 725 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SYT5O00445 386 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CD3EAPO15446 510 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 COQ9O75208 318 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 TNFRSF6BO95407 300 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ATP1A1P05023 1023 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 PDHA1P08559 390 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 STSP08842 583 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 GPR89BP0CG08 455 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 PNMA6AP0CW24 399 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 COX6B1P14854 86 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 PPP3CBP16298 524 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF30P17039 623 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CTPS1P17812 591 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 TNFAIP3P21580 790 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 MST1P26927 711 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SSTR2P30874 369 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 HNRNPH3P31942 346 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CA5AP35218 305 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SERPINF1P36955 418 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 HADHAP40939 763 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CAPZBP47756 277 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SEC24CP53992 1094 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 NANOS3P60323 173 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 TUBB4BP68371 445 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SLC10A7Q0GE19 358 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 TRAF2Q12933 501 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 GPS2Q13227 327 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 FHL3Q13643 280 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 RAPSNQ13702 412 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 TUBB2AQ13885 445 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CCNIQ14094 377 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 PTPRRQ15256 657 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 KYNUQ16719 465 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF630Q2M218 657 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 VWA2Q5GFL6 755 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 PLEKHS1Q5SXH7 462 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ARMC12Q5T9G4 340 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ABHD17BQ5VST6 288 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 LRRC66Q68CR7 880 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 MRNIPQ6NTE8 343 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ABRAXAS1Q6UWZ7 409 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 WASH2PQ6VEQ5 465 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CUZD1Q86UP6 607 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 FJX1Q86VR8 437 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 KRT73Q86Y46 540 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 RAB43Q86YS6 212 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 TMEM126BQ8IUX1 230 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 BBS5Q8N3I7 341 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 GALNT16Q8N428 558 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ENDOVQ8N8Q3 282 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CLEC1AQ8NC01 280 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 FAR1Q8WVX9 515 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 PIH1D2Q8WWB5 315 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ATG4AQ8WYN0 398 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 RSC1A1Q92681 617 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 PTCD3Q96EY7 689 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF514Q96K75 400 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CD180Q99467 661 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 EIF3CQ99613 913 aaKnown RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 MLPHQ9BV36 600 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-228ENST00000554592 TUBB2BQ9BVA1 445 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ACTRT3Q9BYD9 372 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 MYLK2Q9H1R3 596 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SLC25A32Q9H2D1 315 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 NOD2Q9HC29 1040 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SLC40A1Q9NP59 571 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 FGF21Q9NSA1 209 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 KLC4Q9NSK0 619 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 POT1Q9NUX5 634 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 DNPEPQ9ULA0 475 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 NTNG1Q9Y2I2 539 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ATP6V1DQ9Y5K8 247 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 CELSR2Q9HCU4 2923 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 ZFHX3Q15911 3703 aa4.7□□□□□ -1.66
ATXN3-228ENST00000554592 SPENQ96T58 3664 aaKnown RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 A0A0J9YYE9 177 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 CCDC189A1A4V9 331 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 PDZK1P1A8MUH7 402 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 AGPSO00116 658 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 PEX12O00623 359 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DIAPH2O60879 1101 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 KCNJ13O60928 360 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 TRBC1P01850 177 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 CAPN1P07384 714 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 CD63P08962 238 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 EBLN1P0CF75 366 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms